Lottia gigantea v1.0

Download Data

Unless otherwise noted, all files are in FASTA format and compressed with Gnu Zip (gzip).To uncompress files: on Mac use StuffIt, on PC use WinZip or WinRAR.

NOTE: Masked regions are represented with lowercase characters; gaps in the assembly are represented with Ns.

Assembly

Assembled scaffolds:

Lotgi1_assembly_scaffolds.fasta.gz (unmasked)

Lotgi1_assembly_scaffolds_repeatmasked.fasta.gz (masked)

Annotation

"Filtered Models" is the filtered set of models representing the best gene model for each locus.

Filtered Models:

Lotgi1_GeneModels_FilteredModels1_aa.fasta.gz (proteins)

Lotgi1_GeneModels_FilteredModels1_nt.fasta.gz (transcripts)

Lotgi1_GeneModels_FilteredModels1.gff.gz (gff)

All Models:

Lotgi1_GeneModels_AllModels_20070424_aa.fasta.gz (proteins)

Lotgi1_GeneModels_AllModels_20070424_nt.fasta.gz (transcripts)

ESTs

Lotgi1_EstClusters_naClusterCr705LottiaJgi20060727.fasta.gz

Lotgi1_Ests_naEstLottiaJgi20060727.fasta.gz