Lottia gigantea
On August 11, 2015 the JGI computer systems will be undergoing maintenance and access to certain files and tools will be affected. Sorry for the inconvenience.

Download Data

Unless otherwise noted, all files are in FASTA format and compressed with Gnu Zip (gzip).To uncompress files: on Mac use StuffIt, on PC use WinZip or WinRAR.

NOTE: Masked regions are represented with lowercase characters; gaps in the assembly are represented with Ns.

Assembly

Assembled scaffolds:

Lotgi1_assembly_scaffolds.fasta.gz (unmasked)

Lotgi1_assembly_scaffolds_repeatmasked.fasta.gz (masked)

Annotation

"Filtered Models" is the filtered set of models representing the best gene model for each locus.

Filtered Models:

Lotgi1_GeneModels_FilteredModels1_aa.fasta.gz (proteins)

Lotgi1_GeneModels_FilteredModels1_nt.fasta.gz (transcripts)

Lotgi1_GeneModels_FilteredModels1.gff.gz (gff)

All Models:

Lotgi1_GeneModels_AllModels_20070424_aa.fasta.gz (proteins)

Lotgi1_GeneModels_AllModels_20070424_nt.fasta.gz (transcripts)

ESTs

Lotgi1_EstClusters_naClusterCr705LottiaJgi20060727.fasta.gz

Lotgi1_Ests_naEstLottiaJgi20060727.fasta.gz