Takifugu (Fugu) rubripes v4.0
| Assembly v4.0 (October 2004) | ||
| All files are in FASTA format and compressed with gzip. | ||
Unmasked assembly: fugu.041029.scaffolds.fasta.gz Masked assembly: Takru4.allmasked.gz Protein sequence: proteins.Takru4.fasta.gz Transcriptome sequence: transcripts.Takru4.fasta.gz |
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Assembly v3.0 (August 2002) |
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| All files are in FASTA format and compressed with Zip. | ||
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Unmasked assembly: fugu_v3.fasta.Z Masked assembly: fugu_v3_mask.fasta.Z Protein sequence: fugu_v3_prot.fasta.Z Transcriptome sequence: fugu_v3_trans.fasta.Z |
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| Reads |
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All files are in FASTA format and compressed with gzip. NOTE: Masked regions are represented with lowercase characters; gaps in the assembly are represented with Ns. |
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JGI library and quality value files (~2 Kb library insert size): |
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| libraryLPO.fasta.gz (58922 Kb), libraryLPO.fasta.qual.gz (111167 Kb) | ||
| libraryMBF.1.fasta.gz (198786 Kb), libraryMBF.1.fasta.qual.gz (392642 Kb) | ||
| libraryMBF.2.fasta.gz (217327 Kb), libraryMBF.2.fasta.qual.gz (426832 Kb) | ||
| libraryNFP.fasta.gz (79752 Kb), libraryNFP.fasta.qual.gz (155263 Kb) | ||
| libraryXLP.fasta.gz (15408 Kb), libraryXLP.fasta.qual.gz (31219 Kb) | ||
Celera library and quality value files (~2 Kb library insert size): |
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| libraryCRA.fasta.gz (32222 Kb), libraryCRA.fasta.qual.gz (81462 Kb) | ||
Myriad library and quality value files (~2 Kb library insert size): |
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| libraryMYR.fasta.gz (150143 Kb), libraryMYR.fasta.qual.gz (372814 Kb) | ||
| libraryMYR2.fasta.gz (52668 Kb), libraryMYR2.fasta.qual.gz (129911 Kb) | ||
Los Alamos National Labs BAC-ends and quality value files (~80 Kb library insert size): |
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| libraryOML.fasta.gz (16269 Kb), libraryOML.fasta.qual.gz (31247 Kb) | ||
Los Alamos National Labs cosmid-ends and quality value files (~40 Kb library insert size): |
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| libraryLPC.fasta.gz (25173 Kb), libraryLPC.fasta.qual.gz (44946 Kb) | ||
