| Gene |
Probe 1 |
Probe 2 |
Probe 3 |
Probe 4 |
| Noggin |
gaatgacatcacagccgtatggagcctggctaataaatcc |
tccaagcaaccaaccctggccatgggccaccacactactt |
|
|
| GDF-5 |
|
|
|
|
| GDF-6 |
ctgtgggaaattccttgtatccagcaggcatccatccctt |
ggagtgtacacaagatgcattgacaggcacctgttcaaac |
|
|
| Wnt14 |
|
|
|
|
| En-1 |
acagttccaagggcagcgactccaacccggctctgctcct |
tggtgtggcccgcctgggtctactgcactcgctactccga |
|
|
| Msx-1 |
ctctgcttatggctacttaccagcccggggtgaaagtaga |
atccattggaaaccgcttccctgtggggggcatcatgaaa |
|
|
| Msx-2 |
ctttacccatcgcgatgtcttctcccaggaagatcaagga |
acagagacccaagtgaagatctggttccagaacaggagag |
|
|
| Shh |
aggactctcatctccagcgatttcctcctgttcatagaga |
tgatggtggaaccgggcggcaccaaagcggtgagagagct |
|
|
| Gremlin |
gtgcatgttactggcatgtagcagtgaatggccactgcag |
ggatgaactgtctcgtttatgctctaggatcccttttcct |
|
|
| FGF8 |
cgtctccctggctgtggctcggtgccctctcttccagact |
aaggggatgggcggagggaactgcgggagctcccgggact |
|
|
| beta-Globin |
cggtgcaatccaacatctggatgatgtgaagagccacctt |
actgggtaaaacaaatgtctacagagaatgttgtaaacca |
|
|
| alpha-Globin (adult) |
gggcagtataataagcccagaaaccattactatgttattt |
gagcttatgtaaatacccccaaaatgactctatgtcctgt |
|
|
| alpha-Globin (larval) |
|
|
|
|
| Sox3 |
aggagaaccccaagatgcacaactcggagatcagtaagag |
aatgctgctgcctctacctatagcatgtcccctgcctaca |
|
|
| Sox2 |
gcccttcccaatactattagctctagtctcacagtgatga |
tggactatttttgtacagaagaaaacaaaaatctggggag |
|
|
| Nrp1 |
gtggaaagattgctccttctcctctcgtctctactggacc |
atacccactacccctgaggtgaacggaatggacgaatgtg |
aatgtgcgttggaggaacgtgaagccaagcttttctcagg |
|
| Nrp2 |
cagggtacccaaatgattacccacctcatcagaactgtga |
ggataatcagtgctccagaacccaaccagaagattgtact |
|
|
| Xotx2 |
tcaggcataaaggagctcgcttaggcacctcatcggttaa |
atggggggcaaaacaaagtgagaccctctaagaagaagcc |
tctccacatcatcctcatgcatgcagaggtcttaccccat |
|
| HoxB9 |
agttcttcctgctcacatttgctgctggggaacttgtctt |
atgaccggccctggccaatcccaggacccagccactcata |
|
|
| xMeis3 |
acttccagtcttgtccaggaacagctgcccttcttccaca |
acccctctgaagaacagaaaaagcagctagcacaggatac |
|
|
| XKrox-20 |
aatgagaagcgatcgctggatttctcctactcgtccaact |
|
|
|
| EphA4 |
aactgacccatgatgctagcctcactcagaaagtctctcc |
cccacattacaatgccatagctccagacatcactggcaga |
|
|
| En-2 |
gaaggaataagccatcaggatgagctcttttctggcagag |
tttgactgagcagaggaggcaaagtttggctcaggaactc |
|
|
| XNot |
tgttacacagccctgtctttcctgcatttgggcaccactt |
taccctactcccattgcccaaatggttccatgaaccctct |
|
|
| Xbra |
gatgaggttcaaggagctcaccaatgagatgatcgtcacc |
gaatccacatagtgagagttggaggcacccagagaatgat |
|
|
| Derriere |
tctctgctcactgtgtctctagacccatccagctgcaaaa |
gactctggtgcattctgtagaaccagaaagcacccctttg |
|
|
| Xnr1 (Nodals) |
agctgtaccagaaccttgtcatggcaaacgatacagggct |
attgtgcgtcccgataaagatgagccctctctcaatgttg |
|
|
| Xnr2 (Nodals) |
gttaagaacctgcacgagagagtcaggccacgtgtcatta |
ggaatatcccatcctgcaggaatctgatgccgttctaagc |
|
|
| Xnr3 (Nodals) |
agagaagagaatgcccttcctgtgtccccgtgaagatgag |
tcaggagtcaccaagaatctacccagagatggcctttctc |
|
|
| Xnr4 (Nodals) |
cagctacctgaaacacatgtccagcaagcctcaggatcat |
gcagagtttgctgaactactacgctaaaggaaaggccccg |
|
|
| Xnr5 (Nodals) |
gtgccagtgaagatgagacttctgtcaatgctcatgtacg |
tgcccactcttcttcacacaaaggaggccaggttcccttt |
|
|
| Xnr6 (Nodals) |
catctatcccaagaggttcaacgcatttcgttgtgagggg |
gcatatatgggagcaggcattctcagggcatgaagtatcc |
|
|
| Slug alpha |
|
|
|
|
| Slug beta |
cactgcaacagagcatttgcagacagatccaacttgcgag |
aggaggaaagactccagaccaaactttgcgactcacatgc |
|
|
| Xtwi (Twist) |
gtccgcaatcctttgaagaactgcaaagccagagggtcat |
ttgattcttggttcagaaaactgtttctatacaagcggcg |
|
|
| Pax3 |
tgatggatccggtctcctggtagcggcaaaggatcttgga |
aaacactccacccagctggttcaccctgccttggcctaaa |
|
|
| Pax6 |
gtcacagcggagtcaatcaactcgggggagtgtttgtgaa |
cagacatcctcctactcatgcatgctgcccacaagtccat |
|
|
| Pax7 |
ttaggccaaggcagggtgaaccagctgggtggagtgttta |
cggacgtagagaagaagatcgaggagtacaagcgggagaa |
|
|
| Nkx6.1 |
ctcccattgcccaaatggttccatgaaccctctttcatgg |
atttatagtcactgtgttacttccacagtcctgatgcctt |
|
|
| Dbx1 |
tctatccagactgccctgtccagccacaccagctttctca |
cctccccttttaactccagcattgccagtaaaccctcaga |
|
|
| Dbx2 |
|
|
|
|
| Xiro3 (Irx3) |
gagttcgtatggtttgtcttgtgctaattaaacgtcggtc |
tacgctgggcttgaaatgtcaatcacagtgtgagtgccaa |
|
|
| Olig2 |
ttcctttaacctccaagttagtggaagcaatcggaacacc |
gataaaaggggagagtgagagataattaacaaaaaacatg |
|
|
| Nkx2.2 |
gatctgcctgataccaatgacgacgaaggatccattgcag |
tgtcagtcacctgcatatagatctatacagctgtatatgt |
|
|
| Beta-tubulin |
tcagtgtgatgccatcacccaaagtctcagacactgtggt |
tgatcctacacgcagttaccatggagacagtgatttgcac |
|
|
| Pax8 |
ggagattacaaacgccagaaccctacaatgtttgcctggg |
aggctctccctattactacagctctgccacaaggactgca |
|
|
| XHex |
acccatttcacgtggaccatatggacagcccttttatggg |
acccaactcccttctacattgatgatatcctgggaaggag |
|
|
| Nkx2.5 |
tctgaactcactgaggaacttgcccagagagactcctcta |
ccattctctgtaaaggacattttgaacttggagcaacacc |
|
|
| MyoD |
tctcttgtgggcatgcaaagcctgtaagaggaagaccaccaa |
tgacttctacgacgacccctgtttcaatacctcggacatg |
|
|
| XMyf-5 |
agcatgtaagagcacccattggtcaccaccaagcaggtaa |
acttggctacattttgtatttaacgttaataaccaagcct |
|
|
| HoxA |
gctttcacactcgacactcattcctcctccttttgagcag |
gcactttcttttatttttctattgcattaatatgcgctgt |
cttacaccaaggtgcagctaaaggagctggagagggaata |
ccggtgatgtttctttacgacaacagcctggaggagatga |
| HoxB |
tggtcgaactggagaaggagtttcacttcaaccgctacct |
gaaatggccaatctgctcaacctgagcgagaggcaaatca |
gagctggagaaagagttccatttcaatcggtaccttaccc |
acatgacaggtccggatgggaagcggggcaggactggcta |
| HoxC |
accaaccaagggatgtatatgcagactgggagcgatttca |
gaaaacgctgcaggaaattggctgacagctaagagcggaa |
ggcagatcaaaatttggttccagtaccgacggatgaaatg |
gttcccggacaagttacattcgataccagaccctggattt |
| HoxD |
cgccgacgaattgaaatagctcacactttgtgtctgtctg |
atggttccagaacaggagggtcaaggacaagaagatcgtc |
aagaagagggtgccctacaccaagctgcagctcaaagaac |
|
| Tcf-1 |
ggacacatacaatggccagcagagttcagcaccacctctt |
aggactcaatcagtcccacctttcacagcacctcaac |
|
|
| Lef-1 |
aaggggatccccaaaaggagaagatctacgctgagatcag |
tagctcgcaaagaaaggcaactacacatgcagctttaccc |
|
|
| Tcf-3 |
ctccagagcaaaaagcagaacgtgaaaaggagagacgggt |
ttaaagagctggggaggatgtgtcaactgcacctcaacag |
|
|
| Tcf-4 |
aaggcagagagagagaaggaaaggcggatggcaaacaatg |
atggtgcaacttcacctgaagagcgataagccccaaacca |
|
|
| Tshb |
acgtgaatccgctcttttcctacccagtagccattagctg |
atgcaacactggctacactgactgcgtccaagataccatc |
|
|
| Bambi |
aggcagacaccaacatgacaacacaaggaacctcatcacg |
gtctgcacgatgttctgtctcatcccaggagtgatacatc |
|
|
| Bmpr2 |
|
|
|
|
| Tsg |
actgcattttaccccctttcctgccactgaggcaagctat |
tctttggtggccaagtatgaagccctctctcctacccatt |
|
|
| Rb1 |
cgacttttgagagaaatggatatcaacatggatgttctca |
gtacttagagcgctgtgagcatcaaattatggagagcctg |
agacattcaaacacgtactgatccgagatgggcagcatga |
|
| Pitx1 |
cctggcaattgtatgtatgctatgcctatagatcaatcga |
tggccactagtttccatttgcagcgatcatctgaagccag |
|
|
| Pitx2 |
tgggagcctactgtattatacccccaccatcctccatgaa |
gctctgctataagtgaatgagagcagcatcccttgtgcaa |
|
|
| Pitx3 |
gactatgccctcatcaatggtaccttcagcagtgactgga |
ttaccagccagcaacttcaggagctggaggcaacttttc |
|
|
| Lens-1 |
tggtgcagagcttactcaccattccttaggcttgaatggg |
cccagatgacttttgctgtgttgggactgagagggttttg |
|
|
| FOXG1B/BF-1 |
tcccttaacccttgctctgtcaaccttctcgctggacaaa |
agatgcacagaggggacgcttgttgtgtttattttgaagg |
|
|
| EIF4A2(-like) |
atgctctggaaggaaggctgttgggctttttcttctctcc |
ccatcagccatacaacaaagggcaatcattccctgtatca |
|
|
| Zic1 |
ggctgaggaggtgaaagtttctccccaggaagataaaccg |
gccctatctgtgtaagatgtgcgacaaatcgtacacccac |
|
|
| Zic2 |
aacagcttcgtggaacctactcacatgggcgcatttaagc |
ggtccttcatctggggggaatctgaactaagttccccgca |
|
|
| Zic3 |
ccacacagttcaggatgcatttacggccttggaaatgaca |
gggaatttcattgaatctttaatgaacagatatcatgctg |
cccagctgagtttctattggtgcaattcagactgcctcct |
tcctgtgaaagtggctcaatagacagacttttgggctcag |
| Dlx3 |
|
|
|
|
| Eya1 |
atctagccagtccacatagtagacttagtggcagtggtga |
atgccattttggagaatcacaagccactctgacctgatgg |
|
|
| Vax1 |
ccgggcacaatatcttcaacatgcctgtgccatccctact |
tgtaccggctggagatggagttccagaggtgccagtacgt |
|
|
| Vax2 |
ctcatcttctccaaggttaccgaccccactttgttttccc |
gctaatagtatgggcgatggagtgtccgaggagagaagcc |
|
|
| Gli1 |
ccacagaatactgccaccaaatggccatcttggccagtca |
ataggcaacatggccataggagacatgagctccatgctca |
|
|
| Gli2 |
|
|
|
|
| Gli3 |
|
|
|
|
| Xanf1 |
tggtggtttcccataatagaggagttagtcggcggtactt |
ttgagtctctccagcggaaccatgtctcctggtcttcaga |
|
|
| Six3 |
ggacctctaccatatcctggagaatcacaagttcaccaag |
tctgggacggagagcagaaaacgcactgcttcaaggagag |
|
|
| Emx1 |
|
|
|
|
| Emx2 |
|
|
|
|
| XBF2 |
|
|
|
|
| Rx |
agaggatagtgtcctgggctcatttcagactgagctcagt |
tttggtagcccctatgtggactggcagcctataggagact |
|
|
| ET |
|
|
|
|
| Lim2 |
|
|
|
|
| Tailless |
|
|
|
|
| Xwnt-8b |
ctctcacttgggatcttttaccaggccagactcaacactt |
tgccttaaaaggggtaaagctctcagcaagtgggagaaga |
|
|
| Pax2 |
|
|
|
|
| Wnt1 |
|
|
|
|
| Xiro1 |
|
|
|
|
| MafB |
tcagcaaagaggaggtaatacgcctgaagcagaagagacg |
ttttggggttgggaggaagggagggggtgaaaccattgct |
|
|
| Gbx2 |
ttctgcgggaagaatcccaaacacagaaggagaaagtccc |
ccagagcctcagattatgttgtggttaatttattctgtgt |
|
|
| Pintallavis |
atacctcagcagtggactccagaacatgctaaatagagtc |
accacagaccatcttgtccattactctaactacagctctg |
|
|
| Cad1 |
|
|
|
|
| Cad2 |
|
|
|
|
| Cad3 |
|
|
|
|
| FoxD3a & 3b |
caaacgaacccctgattcctgcaggatggtctcttcctat |
ccattggcccaatcttaagtgtccccacaaacctcatctc |
|
|
| Mitf |
cacggattttgctacgacagcaactgatgcgtgagcagat |
gcttggagtccagttataacgaagacattctcttgatgga |
|
|
| Evi-1 |
|
|
|
|
| XL-maf |
|
|
|
|
| XProx1 |
|
|
|
|
| nephrin |
|
|
|
|
| Lim1 |
|
|
|
|
| FoxD5 |
|
|
|
|
| Six1 |
catgtctatgctgccttcctttggcttcactcaggagcaa |
cagaatcagctgtcacccctagatggaggaaagtcgctaa |
|
|
| xWT1 |
ccgtaccagtgtgatttcaaagactgcgagaggcgatttt |
aacctgccaacgaaagttctccaggtccgaccacctgaag |
|
|
| Crygc |
|
|
|
|
| FoxA1/HNF3a |
cctaggaccagtaacattctcctggaaaatgtggtgggct |
ttctctccctgccactcgaactactcgctggctgaatgtt |
|
|
| FoxA2/HNF3b |
ccaggcactcagcttccagtatgctcggggctgtgaaaat |
tactcgtacatctcgctcatcaccatggcgatccagcagt |
|
|
| Gata6 |
tgagtcccgcgaattccttcttcccctgtccgatcaaaca |
tgtggatggaatggaggcaattcgggcgcagagtttcatt |
|
|
| Sox17alpha |
ctagcgacgatcagaatcagggaaagtgctcagtgccaat |
caatgtgaaacggtctgattattgtgtacgtggtacactg |
|
|
| HNF1b |
atggcacaacagccatttatggccactgtcactcagcttc |
ctcctgaagtcttctgctgcttgttgctgctcacaggaat |
|
|
| endodermin |
agatataacgtcccccaccccaaagaagatgccgctttca |
acagcgaagttttgcgaaggaacgaagaagcaccagctgt |
|
|
| FOR1 |
cgtggaaagcaagagacacaaagcttacccccttgctgta |
atgagacagtgggaagacctggatcagaccatggcaaaca |
|
|
| Endocut |
gttctgttatcccctgtgccaaaggatggggtttttcagt |
gagggaatggaagaagtgggatctgatggactggagaaac |
|
|
| Vito |
atcactgcacctgtagttacctcccctgggcatactttct |
acttcgctttaataagtttgtccggctcctcggcaccata |
|
|
| Pdx1 |
ttcttctgctctgccaacttcgccccagtccaatcccatt |
ttattcatcgcatagtacagtgtgctagcatagaggcgta |
|
|
| FLRT3 |
ccgcacttggtttgttttgcacaggaagcagggcaaatac |
atgtgttccctctgctcactgatcctgcatggtactagct |
|
|
| Snail |
acaagtacccacttcctgtgatcccccagccagagatttta |
tgcgactgcgaacccaggaatcccctcatcggctgctaaa |
|
|
| DHCR7 |
ggaagtggattacttctcattggctgccgtcctgttccta |
aacgcctaccacttccactggttctccccgaccatca |
|
|
| Sizzled |
tcgcacaactgcaaacatgactggagtcttcctgctcctc |
ccgcagcatgtgtgttgctgtaagagacagttgtgcccca |
|
|
| WNT11 |
ggatggtttagtccctgaacagtctcagctctgcaaaagg |
gtcaccaggggtataaatgccagaggcagcaagaacaaag |
|
|
| Mix.2 |
tggactcattcagccaacaactggaggacttctacccttc |
gccatagacatatggcacttggactctggggtgggaatgt |
|
|
| c-fos |
agcagcaccgaatatgatgcagcttcttcccgttgcagta |
tggtttgacagcttggtgagccaggactgacggtctttct |
|
|
| XL045a20 |
ccagaacatttcctgcaactgtccttgtggctggaactga |
gctattgatgtgctggggaaggacgagctcgatcagacct |
|
|
| Rnd1 |
gttggatttgtcccaccatactccctgcatcaccatgaag |
gtatattccgagcagcgtcttccgcgtgtgtgaacaaagc |
|
|
| Jun-B |
cacacactttgtccctggcttagggggacttgtgggtatt |
acggaggagcaagaatgctttgtggatgggttcgttaagg |
|
|
| TA2-like |
|
|
|
|
| xIRG |
agctctgatattgccctcattgcccagacatgttctcagc |
gtttcaccctccctcagttgtcggaaccatgggaagtgca |
|
|
| siamois |
ggtttggttccagaacagaagagccagacacctcccaaga |
cagacatgacctgtgagcctgaaatggagcagattgtctc |
|
|
| chordin |
ttgctgccatgaagcagtgggattctagaggcagcatttg |
ataatgagcgctggcatccaactgtgacaccctttggaga |
|
|
| XSPR-2 |
tgatgaactgcagaggcaccttaggactcatactggtgag |
tggtgtccctaaagtgcagtatcctggccacatgcaaact |
|
|
| MAP kinase phosphatase X17C |
cctgttctctcctcaatgctagagaagttgagacccgctg |
atagttcctgtggcagtagctctccaccggtccttggttt |
|
|
| frizzled-10B |
gggcagctctatgttatccaggaaggcttggaaagtacag |
taaggagggtgatgaaaactggtggggagaacacagacaa |
|
|
| Xlim-5 |
ctgaataaggatgcgcgaattgccaagcttggcactcaga |
ggtgccatctagtgatctgtttcaacactgcaactcttcc |
|
|
| FGF-3 |
ccccgaatgtgagtttgtggaaagaattcacgagctcgga |
gtgctagacaacaaggaccatgacgccgtgaggttatttc |
|
|
| eFGF |
ggtatttttagagcaattgactccttaaaccacgtgtgcc |
ggtaaagtgctatggctgagctgttggggaagatcaacac |
|
|
| Eomesodermin |
|
|
|
|
| Edge-2 |
gctgggacttgtctcaggggaaaggctgtgtctctcccaa |
agatgtcaaaccagcgggtgtgcatcctcattgcctgcat |
|
|
| Mixer |
tccgccaaagcaagaaatggtctcccccgtatcttcagct |
ttctctccagtctcagattctgggcgtagtgatggctcta |
|
|
| Xopl |
atcaaccccttcgcagacggcatgggagctttcaagctca |
gccctatctgtgtaagatgtgcgacaaatcgtacacccac |
|
|
| Xag1 |
tgcacattgtgctccttctgatgctggagagatgaccaca |
tggtaactctgccaagtctgatccagagcccgtaccaata |
|
|
| Xcg |
|
|
|
|
| Gob4 |
|
|
|
|
| MetTK |
|
|
|
|
| HNF1a/LFB1 |
taacagcgttggtagcagcttgaccacactgcagtctgtt |
tctccttcacacagcaccattgacagtttcatgtccaccc |
|
|
| Evx2 |
aggggaaagaagctcagccagtatcccgaagtttccaaag |
cctgctgcaaatcatcatcatctctatctacagcagcagc |
|
|
| Insertion mutant |
|
|
|
|
| CaV2.2 |
|
|
|
|
| VegT |
gcctatagctacagtgctgcaatgagaaactgctgtcagg |
gtctccatctggttgtacaccttcaataaatgtcctcctt |
|
|
| Geminin L & H |
aaggctaaagttgaggtggctgttgatctagagcacagag |
ggaaatgcaccacgaagccttgaagacttaaagaatctgg |
|
|
| XL17 |
|
|
|
|
| XL18 |
agggtggaagagtgttatgcaaccccaaccaatgacccaa |
ccccatgctccttaattttacctgcagttacaacctgaca |
|
|
| Eya2 |
|
|
|
|
| Eya3 |
ttcagacaccatctccacctgctgtgctaacctcatcagg |
ctcagccatacacagtttaccctcaggcttcgccaacgta |
|
|
| XCtk1 |
|
|
|
|
| Xmc |
|
|
|
|
| Fibromodulin |
|
|
|
|
| PAPC |
|
|
|
|
| Fullback |
|
|
|
|
| ADMP |
|
|
|
|
| Retrotransposon 1a11 |
|
|
|
|
| Prickle |
|
|
|
|
| MHC-Larynx |
|
|
|
|
| Wnt5a |
|
|
|
|
| Glypican4/6 |
|
|
|
|
| Formin |
|
|
|
|