Xenopus tropicalis v4.1
TRANSCRIPT ANNOTATION 
Xentr4/scaffold_162:2030802-2053381 gw1.162.78.1 Hide 
AttributeValueCreatorAction
Name  
Description  
Model Notes  
Defline  
Disposition  
Literature  
Assessment
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NoteCreatorAction
EST evidence  
Needs GO  
EvidenceTypeCreatorAction
 

FUNCTIONAL (PROTEIN) ANNOTATION
User-Assigned Ontology       
ASPECT DETAILS
function
      
process
      
component
      
enzyme
      
kog
      
Automatic Ontology and Best Protein Alignments for transcript 100502
Automatic Ontology
ASPECT
GO/ECSUPPORTAction
function
16829  Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.IPR001030  Aconitate hydratase, N-terminal 
16836  Catalysis of the cleavage of a carbon-oxygen bond by elimination of water.IPR000573  Aconitate hydratase, C-terminal 
3723  Interacting selectively with an RNA molecule or a portion thereof.IPR006249  Aconitate hydratase 1 
3994  Catalysis of the reaction: citrate = cis-aconitate + H2O = isocitrate, i.e. the interconversion of citrate and isocitrate via the labile, enzyme-bound intermediate cis-aconitate. Water is removed from one part of the citrate molecule and added back to a different atom to form isocitrate.IPR006249  Aconitate hydratase 1 
5506  Interacting selectively with iron (Fe) ions.IPR006249  Aconitate hydratase 1 
process
8152  Processes that cause many of the chemical changes in living organisms, including anabolism and catabolism. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.IPR001030  Aconitate hydratase, N-terminal 
 IPR000573  Aconitate hydratase, C-terminal 
 IPR001030  Aconitate hydratase, N-terminal 

High Scoring Alignments 

gi|27696444|gb|AAH43991.1|
Ratireb-prov protein [Xenopus laevis]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
4266
0.0
93%
100%
100%

hsa:48
ACO1, IREB1; aconitase 1, soluble [EC:4.2.1.3] [KO:K01680]  [Homo sapiens]

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GO/EC Classification
Score
Evalue
% id
% target
% model
EC4.2.1.3: aconitate hydratase
4048
0.0
85%
100%
100%

mmu:11428
Aco1; aconitase 1  [Mus musculus]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
4042
0.0
85%
100%
100%

rno:50655
Ratireb; iron-responsive element-binding protein [EC:4.2.1.3] [KO:K01680]  [Rattus norvegicus]

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GO/EC Classification
Score
Evalue
% id
% target
% model
EC4.2.1.3: aconitate hydratase
3998
0.0
84%
100%
100%

gi|8659555|ref|NP_002188.1|
aconitase 1 [Homo sapiens] >gi|55663278|emb|CAH72598.1| aconitase 1, soluble [Homo sapiens] >gi|17390225|gb|AAH18103.1| Aconitase 1 [Homo sapiens] >gi|3123225|sp|P21399|IREB1_HUMAN Iron-responsive element binding protein 1 (IRE-BP 1) (Iron regulatory protein 1) (IRP1) (Ferritin repressor protein) (Aconitate hydratase) (Citrate hydro-lyase) (Aconitase) >gi|33963|emb|CAA77651.1| iron regulatory factor [Homo sapiens]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
3838
0.0
82%
100%
100%

gi|55633089|ref|XP_520523.1|
PREDICTED: aconitase 1 [Pan troglodytes]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
3834
0.0
82%
95%
100%

gi|88192220|pdb|2B3Y|B
Chain B, Structure Of A Monoclinic Crystal Form Of Human Cytosolic Aconitase (Irp1) >gi|88192219|pdb|2B3Y|A Chain A, Structure Of A Monoclinic Crystal Form Of Human Cytosolic Aconitase (Irp1) >gi|88192218|pdb|2B3X|A Chain A, Structure Of An Orthorhombic Crystal Form Of Human Cytosolic Aconitase (Irp1)  [no tax name]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
3832
0.0
82%
100%
100%

gi|239121|gb|AAA03251.1|
chimeric iron-responsive element-binding protein, chimeric IRE-BP [mice, Peptide Recombinant, 889 aa]  [Mus sp.]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
3820
0.0
82%
100%
100%

gi|76624106|ref|XP_590607.2|
PREDICTED: similar to Iron-responsive element binding protein 1 (IRE-BP 1) (Iron regulatory protein 1) (IRP1) (Ferritin repressor protein) (Aconitate hydratase) (Citrate hydro-lyase) (Aconitase) [Bos taurus]  [no tax name]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
3806
6.68464E-18
81%
94%
100%

gi|8394162|ref|NP_059017.1|
aconitase 1 [Rattus norvegicus] >gi|2492645|sp|Q63270|IREB1_RAT Iron-responsive element binding protein 1 (IRE-BP 1) (Iron regulatory protein 1) (IRP1) (Ferritin repressor protein) (Aconitate hydratase) (Citrate hydro-lyase) (Aconitase) >gi|393207|gb|AAA41449.1| iron-responsive element-binding protein

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
3788
1.91223E-18
80%
100%
100%