Xenopus tropicalis v4.1

TRANSCRIPT ANNOTATION

Xentr4/scaffold_89:2614182-2637113 gw1.89.89.1 Hide

Attribute

Value

Creator

Action

Name

Description

Model Notes

Defline

Disposition

Literature

Assessment

Note

Creator

Action

EST evidence

Needs GO

Evidence

Type

Creator

Action

FUNCTIONAL (PROTEIN) ANNOTATION

User-Assigned Ontology

ASPECT

DETAILS

function

process

component

enzyme

kog

Automatic Ontology and Best Protein Alignments for transcript 101434

Automatic Ontology

ASPECT

GO/EC

SUPPORT

Action

function

8168 Catalysis of the transfer of a methyl group to an acceptor molecule.

IPR007757 MT-A70

process

6139 The chemical reactions involving nucleobases, nucleosides, nucleotides and nucleic acids.

IPR007757 MT-A70

component

5634 A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

IPR007757 MT-A70

High Scoring Alignments
gi\|56118875\|ref\|NP_001007920.1\| MGC79735 protein [Xenopus tropicalis] >gi\|51513454\|gb\|AAH80361.1\| MGC79735 protein [Xenopus tropicalis] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	2136	0.0	83%	100%	100%

gi\|46250316\|gb\|AAH68744.1\| MGC81236 protein [Xenopus laevis] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	2119	0.0	82%	100%	100%

rno:295428 LOC295428; similar to KIAA1627 protein [Rattus norvegicus] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	2066	0.0	86%	100%	100%

gi\|71896697\|ref\|NP_001026319.1\| hypothetical protein LOC422684 [Gallus gallus] >gi\|53132487\|emb\|CAG31908.1\| hypothetical protein [Gallus gallus] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	1872	0.0	89%	88%	89%

gi\|34859963\|ref\|XP_215698.2\| PREDICTED: similar to RIKEN cDNA G430022H21 gene [Rattus norvegicus] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	1867	0.0	83%	89%	89%

gi\|74147197\|dbj\|BAE27502.1\| unnamed protein product [Mus musculus] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	1863	0.0	83%	89%	89%

gi\|13938595\|gb\|AAH07449.1\| KIAA1627 protein [Homo sapiens] >gi\|16306892\|gb\|AAH06565.1\| Hypothetical protein LOC57721 [Homo sapiens] >gi\|16550312\|dbj\|BAB70954.1\| unnamed protein product [Homo sapiens] >gi\|55732463\|emb\|CAH92932.1\| hypothetical protein [Pongo pygmaeus] >gi\|24308265\|ref\|NP_066012.1\| hypothetical protein LOC57721 [Homo sapiens] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	1857	0.0	82%	89%	89%

gi\|10047331\|dbj\|BAB13453.1\| KIAA1627 protein [Homo sapiens] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	1857	0.0	82%	86%	89%

gi\|30354675\|gb\|AAH52204.1\| RIKEN cDNA G430022H21 gene [Mus musculus] >gi\|42517136\|ref\|NP_964000.1\| hypothetical protein LOC210529 [Mus musculus] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	1855	0.0	82%	89%	89%

gi\|68354400\|ref\|XP_693732.1\| PREDICTED: similar to CG7818-PA [Danio rerio] >gi\|46309507\|ref\|NP_996954.1\| hypothetical protein LOC404603 [Danio rerio] >gi\|42542893\|gb\|AAH66377.1\| Hypothetical protein zgc:77296 [Danio rerio] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	1783	0.0	79%	89%	89%