Xenopus tropicalis v4.1

Xenopus tropicalis v4.1

TRANSCRIPT ANNOTATION

Xentr4/scaffold_350:138413-154861 gw1.350.4.1 Hide

Attribute

Value

Creator

Action

Name

Description

Model Notes

Defline

Disposition

Literature

Assessment

?

Note

Creator

Action

EST evidence

Needs GO

Evidence

Type

Creator

Action

FUNCTIONAL (PROTEIN) ANNOTATION

User-Assigned Ontology

ASPECT

DETAILS

function

process

component

enzyme

kog

Automatic Ontology and Best Protein Alignments for transcript 10985

Automatic Ontology

ASPECT

GO/EC

SUPPORT

Action

High Scoring Alignments
gi\|27696381\|gb\|AAH43881.1\| Dkfzp434h2226-prov protein [Xenopus laevis] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		3395	0.0	94%	97%	100%

gi\|62643028\|ref\|XP_574861.1\| PREDICTED: similar to RIKEN cDNA 9930036E21 gene [Rattus norvegicus] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		2913	0.0	82%	97%	100%

gi\|51476517\|emb\|CAH18245.1\| hypothetical protein [Homo sapiens] >gi\|56790897\|ref\|NP_001007528.1\| LMBR1 domain containing 2 [Homo sapiens] >gi\|83405920\|gb\|AAI10507.1\| LMBR1 domain containing 2 [Homo sapiens] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		2898	0.0	80%	97%	100%

gi\|31559855\|ref\|NP_796152.2\| LMBR1 domain containing 2 [Mus musculus] >gi\|26348001\|dbj\|BAC37649.1\| unnamed protein product [Mus musculus] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		2898	0.0	81%	97%	100%

gi\|74148961\|dbj\|BAE32158.1\| unnamed protein product [Mus musculus] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		2895	0.0	81%	97%	100%

gi\|71896103\|ref\|NP_001026750.1\| LMBR1 domain containing 2 [Gallus gallus] >gi\|60098997\|emb\|CAH65329.1\| hypothetical protein [Gallus gallus] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		2806	0.0	78%	97%	100%

gi\|63146287\|gb\|AAH95971.1\| Lmbrd2 protein [Mus musculus] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		2694	0.0	76%	97%	100%

dre:335257 zgc:73387 [Danio rerio] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		2687	0.0	74%	97%	100%

gi\|55625688\|ref\|XP_527193.1\| PREDICTED: similar to hypothetical protein [Pan troglodytes] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		2667	0.0	80%	97%	93%

gi\|38648890\|gb\|AAH63324.1\| Unknown (protein for MGC:73387) [Danio rerio] >gi\|41152363\|ref\|NP_956238.1\| hypothetical protein LOC335257 [Danio rerio] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		2663	0.0	70%	97%	100%