Xenopus tropicalis v4.1

Xenopus tropicalis v4.1

TRANSCRIPT ANNOTATION

Xentr4/scaffold_456:528318-532941 gw1.456.102.1 Hide

Attribute

Value

Creator

Action

Name

Description

Model Notes

Defline

Disposition

Literature

Assessment

?

Note

Creator

Action

EST evidence

Needs GO

Evidence

Type

Creator

Action

FUNCTIONAL (PROTEIN) ANNOTATION

User-Assigned Ontology

ASPECT

DETAILS

function

process

component

enzyme

kog

Automatic Ontology and Best Protein Alignments for transcript 135100

Automatic Ontology

ASPECT

GO/EC

SUPPORT

Action

High Scoring Alignments
rno:316794 LOC316794; similar to C6.1A protein [Rattus norvegicus] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		997	0.0	80%	77%	100%

rno:299769 LOC299769; similar to putative C6.1A-like protease [Rattus norvegicus] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		913	0.0	74%	76%	98%

ath:At3g06820 F3E22.4; mov34 family protein [Arabidopsis thaliana] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		331	3.9E-37	29%	90%	76%

ath:At1g80210 F18B13.28; expressed protein [Arabidopsis thaliana] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		175	1.3E-15	23%	68%	66%

ath:At5g23540 MQM1.19; 26S proteasome regulatory subunit (RPN11), putative [KO:K03030] [Arabidopsis thaliana] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		121	3.6E-8	35%	21%	28%

pfa:MAL13P1.343 proteasome regulatory subunit, putative [KO:K03030] [Plasmodium falciparum 3D7] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		120	5.0E-8	19%	52%	38%

cel:K07D4.3 rpn-11; Proteasome regulatory particle, non-atpase-like protein 11 [KO:K03030] [Caenorhabditis elegans] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		116	1.8E-7	33%	21%	28%

hsa:10213 PSMD14; proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 [KO:K03030] [Homo sapiens] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		114	3.4E-7	34%	21%	28%

rno:295644 LOC295644; similar to 26S proteasome-associated pad1 homolog [Rattus norvegicus] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		114	3.4E-7	34%	17%	28%

spo:SPAC31G5.13 bfr2; pad1 protein; 26S proteasome subunit [KO:K03030] [Schizosaccharomyces pombe] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		114	3.4E-7	47%	14%	17%