Xenopus tropicalis v4.1
TRANSCRIPT ANNOTATION 
Xentr4/scaffold_666:397017-444936 fgenesh1_pg.C_scaffold_666000009 Hide 
AttributeValueCreatorAction
Name  
Description  
Model Notes  
Defline  
Disposition  
Literature  
Assessment
 ? 
NoteCreatorAction
EST evidence  
Needs GO  
EvidenceTypeCreatorAction
 

FUNCTIONAL (PROTEIN) ANNOTATION
User-Assigned Ontology       
ASPECT DETAILS
function
      
process
      
component
      
enzyme
      
kog
      
Automatic Ontology and Best Protein Alignments for transcript 184231
Automatic Ontology
ASPECT
GO/ECSUPPORTAction
process
7155  The attachment of a cell, either to another cell or to the extracellular matrix, via cell adhesion molecules.IPR009138  Neural cell adhesion 
component
16020  Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.IPR009138  Neural cell adhesion 

High Scoring Alignments 

hsa:4685
NCAM2; neural cell adhesion molecule 2  [Homo sapiens]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
3143
0.0
79%
89%
96%

gi|3334268|sp|O15394|NCAM2_HUMAN
Neural cell adhesion molecule 2 precursor (N-CAM 2)  [Homo sapiens]

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GO/EC Classification
Score
Evalue
% id
% target
% model
MF5194: OBSOLETE. Mediates the adhesion of the cell to other cells or to the extracellular matrix.
BP7155: The attachment of a cell, either to another cell or to the extracellular matrix, via cell adhesion molecules.
BP7158: The attachment of an adhesion molecule on a neuronal cell to a nonidentical adhesion molecule in an adjacent cell.
CC16021: Penetrating at least one phospholipid bilayer of a membrane. Also refers to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence spans the membrane.
CC5886: The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
3099
0.0
78%
89%
96%

gi|3334269|sp|O35136|NCAM2_MOUSE
Neural cell adhesion molecule 2 precursor (N-CAM 2) (RB-8 neural cell adhesion molecule) (R4B12)  [Mus musculus]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
3092
0.0
77%
89%
96%

rno:288280
Ncam2; neural cell adhesion molecule 2  [Rattus norvegicus]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
3048
0.0
76%
89%
96%

mmu:17968
Ncam2; neural cell adhesion molecule 2  [Mus musculus]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
2770
0.0
75%
93%
87%

dre:114441
ncam2; neural cell adhesion molecule 2  [Danio rerio]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
2475
0.0
62%
93%
96%

gi|2851523|sp|P13590|NCAM1_CHICK
Neural cell adhesion molecule 1, 180 kDa isoform precursor (N-CAM 180)  [Gallus gallus]

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GO/EC Classification
Score
Evalue
% id
% target
% model
MF5194: OBSOLETE. Mediates the adhesion of the cell to other cells or to the extracellular matrix.
BP7155: The attachment of a cell, either to another cell or to the extracellular matrix, via cell adhesion molecules.
CC16021: Penetrating at least one phospholipid bilayer of a membrane. Also refers to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence spans the membrane.
1602
0.0
44%
69%
96%

dre:30447
ncam1; neural cell adhesion molecule 1  [Danio rerio]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
1600
0.0
45%
88%
96%

gi|127855|sp|P16170|NCA11_XENLA
Neural cell adhesion molecule 1-A precursor  [Xenopus laevis]

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GO/EC Classification
Score
Evalue
% id
% target
% model
MF5194: OBSOLETE. Mediates the adhesion of the cell to other cells or to the extracellular matrix.
BP7155: The attachment of a cell, either to another cell or to the extracellular matrix, via cell adhesion molecules.
CC16021: Penetrating at least one phospholipid bilayer of a membrane. Also refers to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence spans the membrane.
1586
0.0
43%
69%
96%

gi|400398|sp|P31836|NCAM1_BOVIN
Neural cell adhesion molecule 1, 140 kDa isoform precursor (N-CAM 140) (NCAM-140)  [Bos taurus]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
1574
0.0
44%
89%
96%