Xenopus tropicalis v4.1

Xenopus tropicalis v4.1

TRANSCRIPT ANNOTATION

Xentr4/scaffold_144:273895-289180 gw1.144.9.1 Hide

Attribute

Value

Creator

Action

Name

Description

Model Notes

Defline

Disposition

Literature

Assessment

?

Note

Creator

Action

EST evidence

Needs GO

Evidence

Type

Creator

Action

FUNCTIONAL (PROTEIN) ANNOTATION

User-Assigned Ontology

ASPECT

DETAILS

function

process

component

enzyme

kog

Automatic Ontology and Best Protein Alignments for transcript 21357

Automatic Ontology

ASPECT

GO/EC

SUPPORT

Action

High Scoring Alignments
gi\|62860182\|ref\|NP_001016643.1\| hypothetical protein LOC549397 [Xenopus tropicalis] >gi\|89269559\|emb\|CAJ83011.1\| novel Leucine Rich Repeat domain containing protein [Xenopus tropicalis] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		1129	0.0	100%	92%	100%

gi\|56270221\|gb\|AAH87459.1\| LOC496055 protein [Xenopus laevis] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		1057	0.0	92%	67%	100%

gi\|22164766\|ref\|NP_663730.1\| hypothetical protein LOC69312 isoform 2 [Mus musculus] >gi\|18490771\|gb\|AAH22722.1\| RIKEN cDNA 4930418G15 [Mus musculus] >gi\|26345552\|dbj\|BAC36427.1\| unnamed protein product [Mus musculus] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		772	0.0	69%	68%	97%

gi\|73999455\|ref\|XP_535092.2\| PREDICTED: similar to CG31623-PA [Canis familiaris] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		770	0.0	67%	89%	97%

gi\|74354315\|gb\|AAI02656.1\| Unknown (protein for MGC:127941) [Bos taurus] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		764	0.0	67%	90%	97%

gi\|67968824\|dbj\|BAE00769.1\| unnamed protein product [Macaca fascicularis] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		763	0.0	68%	68%	97%

gi\|49117787\|gb\|AAH72707.1\| Zgc:91834 [Danio rerio] >gi\|50345064\|ref\|NP_001002202.1\| hypothetical protein LOC431749 [Danio rerio] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		697	0.0	62%	76%	100%

gi\|72110284\|ref\|XP_786243.1\| PREDICTED: similar to CG5851-PA [Strongylocentrotus purpuratus] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		669	0.0	48%	71%	100%

gi\|61966709\|ref\|NP_001013648.1\| hypothetical protein LOC286187 [Homo sapiens] >gi\|33392702\|gb\|AAH55413.1\| Similar to RIKEN cDNA 1700011J18 [Homo sapiens] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		660	0.0	67%	95%	86%

gi\|50731570\|ref\|XP_418281.1\| PREDICTED: similar to RIKEN cDNA 1700011J18 [Gallus gallus] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		651	0.0	67%	73%	87%