Xenopus tropicalis v4.1

TRANSCRIPT ANNOTATION

Xentr4/scaffold_96:1275126-1282559 estExt_Genewise1.C_960219 Hide

Attribute

Value

Creator

Action

Name

Description

Model Notes

Defline

Disposition

Literature

Assessment

Note

Creator

Action

EST evidence

Needs GO

Evidence

Type

Creator

Action

FUNCTIONAL (PROTEIN) ANNOTATION

User-Assigned Ontology

ASPECT

DETAILS

function

process

component

enzyme

kog

Automatic Ontology and Best Protein Alignments for transcript 271961

Automatic Ontology

ASPECT

GO/EC

SUPPORT

Action

function

3824 Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.	IPR001932 Protein phosphatase 2C-like
4722 Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate.	IPR000222 Protein phosphatase 2C

process

6470 The process of removing one or more phosphoric residues from a protein.

IPR000222 Protein phosphatase 2C

component

8287 A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein.

IPR000222 Protein phosphatase 2C

High Scoring Alignments
gi\|51703508\|gb\|AAH81088.1\| MGC82628 protein [Xenopus laevis] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	2686	0.0	96%	99%	100%

gi\|55631046\|ref\|XP_528191.1\| PREDICTED: similar to PPM2C protein [Pan troglodytes] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	2453	0.0	82%	43%	99%

gi\|40675384\|gb\|AAH64978.1\| PPM2C protein [Homo sapiens] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	2453	0.0	82%	88%	99%

gi\|45439339\|ref\|NP_060914.2\| pyruvate dehydrogenase phosphatase precursor [Homo sapiens] >gi\|55249961\|gb\|AAH47619.1\| Pyruvate dehydrogenase phosphatase, precursor [Homo sapiens] >gi\|68226693\|gb\|AAH98343.1\| Pyruvate dehydrogenase phosphatase, precursor [Homo sapiens] >gi\|78099789\|sp\|Q9P0J1\|PDP1_HUMAN [Pyruvate dehydrogenase [Lipoamide]]-phosphatase 1, mitochondrial precursor (PDP 1) (Pyruvate dehydrogenase phosphatase, catalytic subunit 1) (PDPC 1) (Protein phosphatase 2C) view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	2453	0.0	82%	99%	99%

gi\|27806819\|ref\|NP_776374.1\| pyruvate dehydrogenase phosphatase [Bos taurus] >gi\|414797\|gb\|AAA30697.1\| pyruvate dehydrogenase phosphatase view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	2452	0.0	82%	90%	99%

gi\|548465\|sp\|P35816\|PDP1_BOVIN [Pyruvate dehydrogenase [Lipoamide]]-phosphatase 1, mitochondrial precursor (PDP 1) (Pyruvate dehydrogenase phosphatase, catalytic subunit 1) (PDPC 1) (Protein phosphatase 2C) [Bos taurus] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	2452	0.0	82%	99%	99%

gi\|55733171\|emb\|CAH93269.1\| hypothetical protein [Pongo pygmaeus] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	2450	0.0	82%	95%	99%

gi\|55729245\|emb\|CAH91358.1\| hypothetical protein [Pongo pygmaeus] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	2450	0.0	82%	99%	99%

gi\|74210452\|dbj\|BAE23403.1\| unnamed protein product [Mus musculus] >gi\|84794625\|ref\|NP_001028625.1\| protein phosphatase 2C, magnesium dependent, catalytic subunit [Mus musculus] >gi\|85701163\|sp\|Q3UV70\|PDP1_MOUSE [Pyruvate dehydrogenase [Lipoamide]]-phosphatase 1, mitochondrial precursor (PDP 1) (Pyruvate dehydrogenase phosphatase, catalytic subunit 1) (PDPC 1) (Protein phosphatase 2C) view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	2450	0.0	82%	99%	99%

gi\|55729931\|emb\|CAH91692.1\| hypothetical protein [Pongo pygmaeus] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	2446	0.0	82%	99%	99%