Xenopus tropicalis v4.1
TRANSCRIPT ANNOTATION 
Xentr4/scaffold_154:1962193-1967558 estExt_Genewise1.C_1540040 Hide 
AttributeValueCreatorAction
Name  
Description  
Model Notes  
Defline  
Disposition  
Literature  
Assessment
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NoteCreatorAction
EST evidence  
Needs GO  
EvidenceTypeCreatorAction
 

FUNCTIONAL (PROTEIN) ANNOTATION
User-Assigned Ontology       
ASPECT DETAILS
function
      
process
      
component
      
enzyme
      
kog
      
Automatic Ontology and Best Protein Alignments for transcript 274582
Automatic Ontology
ASPECT
GO/ECSUPPORTAction
function
8373  Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors.IPR001675  Glycosyl transferase, family 29 
process
6486  The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins.IPR001675  Glycosyl transferase, family 29 
component
16020  Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.IPR001675  Glycosyl transferase, family 29 
5794  A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.IPR001675  Glycosyl transferase, family 29 

High Scoring Alignments 

gi|57162059|emb|CAI39648.1|
ganglioside GT1 synthase [Oryzias latipes]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
782
0.0
63%
66%
95%

gi|64966435|emb|CAG29207.1|
alpha-2,6-sialyltransferase [Takifugu rubripes]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
740
0.0
60%
66%
95%

gi|46425426|emb|CAG26709.1|
alpha-2,6-sialyltransferase ST6GalNAc VI [Takifugu rubripes]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
740
0.0
60%
64%
95%

gi|64966424|emb|CAG29204.1|
alpha-2,6-sialyltransferase [Danio rerio]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
738
0.0
61%
67%
95%

gi|46425432|emb|CAG26712.1|
alpha-2,6-sialyltransferase ST6GalNAc VI [Danio rerio]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
736
0.0
61%
65%
95%

gi|47523928|ref|NP_999601.1|
beta-galactosamide alpha-2,6-sialyltransferase [Sus scrofa] >gi|46275276|emb|CAF06585.2| beta-galactosamide alpha-2,6-sialyltransferase [Sus scrofa]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
622
0.0
51%
61%
97%

gi|46425422|emb|CAG26707.1|
alpha-2,6-sialyltransferase ST6GalNAc V [Xenopus tropicalis]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
620
0.0
51%
64%
97%

gi|46425420|emb|CAG26706.1|
alpha-2,6-sialyltransferase ST6GalNAc V [Gallus gallus]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
618
0.0
51%
60%
95%

gi|50751428|ref|XP_422393.1|
PREDICTED: similar to alpha-2,6-sialyltransferase ST6GalNAc V [Gallus gallus]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
618
0.0
51%
57%
95%

gi|73960149|ref|XP_855487.1|
PREDICTED: similar to sialyltransferase 7E [Canis familiaris]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
615
0.0
51%
59%
95%