Xenopus tropicalis v4.1

TRANSCRIPT ANNOTATION

Xentr4/scaffold_169:1505072-1505382 estExt_Genewise1.C_1690030 Hide

Attribute

Value

Creator

Action

Name

Description

Model Notes

Defline

Disposition

Literature

Assessment

Note

Creator

Action

EST evidence

Needs GO

Evidence

Type

Creator

Action

FUNCTIONAL (PROTEIN) ANNOTATION

User-Assigned Ontology

ASPECT

DETAILS

function

process

component

enzyme

kog

Automatic Ontology and Best Protein Alignments for transcript 275324

Automatic Ontology

ASPECT

GO/EC

SUPPORT

Action

function

1584 The group of G-protein coupled receptors that are structurally/functionally related to the rhodopsin receptor.

IPR000276 Rhodopsin-like GPCR superfamily

process

7186 The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand.

IPR000276 Rhodopsin-like GPCR superfamily

component

16021 Penetrating at least one phospholipid bilayer of a membrane. Also refers to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence spans the membrane.

IPR000276 Rhodopsin-like GPCR superfamily

High Scoring Alignments
gi\|50729636\|ref\|XP_416594.1\| PREDICTED: similar to G protein-coupled receptor 161; G-protein coupled receptor [Gallus gallus] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	217	4.20563E-23	91%	9%	100%

gi\|24476016\|ref\|NP_722561.1\| G protein-coupled receptor 161 isoform 2 [Homo sapiens] >gi\|20381353\|gb\|AAH28163.1\| G protein-coupled receptor 161 [Homo sapiens] >gi\|30526190\|gb\|AAP32300.1\| G-protein coupled receptor RE2 [Homo sapiens] >gi\|56203274\|emb\|CAI22623.1\| G protein-coupled receptor 161 [Homo sapiens] >gi\|48428085\|sp\|Q8N6U8\|GP161_HUMAN Probable G-protein coupled receptor 161 (G-protein coupled receptor RE2) view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	215	8.23001E-23	89%	9%	100%

gi\|55588720\|ref\|XP_524954.1\| PREDICTED: hypothetical protein XP_524954 [Pan troglodytes] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	215	8.23001E-23	89%	6%	100%

gi\|6677701\|ref\|NP_031395.1\| G protein-coupled receptor 161 isoform 1 [Homo sapiens] >gi\|56203275\|emb\|CAI22624.1\| G protein-coupled receptor 161 [Homo sapiens] >gi\|3659903\|gb\|AAC61598.1\| G-protein coupled receptor RE2 [Homo sapiens] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	215	8.23001E-23	89%	12%	100%

gi\|82571550\|gb\|AAI10146.1\| Unknown (protein for MGC:134300) [Bos taurus] [no tax name] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	215	8.23001E-23	89%	9%	100%

gi\|82882132\|ref\|XP_922351.1\| PREDICTED: similar to G protein-coupled receptor 161 isoform 2 isoform 4 [Mus musculus] >gi\|63479947\|ref\|XP_136361.4\| PREDICTED: similar to G protein-coupled receptor 161 isoform 2 isoform 1 [Mus musculus] [no tax name] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	215	8.23001E-23	89%	8%	100%

gi\|82883058\|ref\|XP_892348.1\| PREDICTED: similar to G protein-coupled receptor 161 isoform 2 isoform 2 [Mus musculus] [no tax name] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	215	8.23001E-23	89%	9%	100%

gi\|82883060\|ref\|XP_902433.1\| PREDICTED: similar to G protein-coupled receptor 161 isoform 2 isoform 3 [Mus musculus] [no tax name] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	215	8.23001E-23	89%	9%	100%

gi\|48428085\|sp\|Q8N6U8\|GP161_HUMAN Probable G-protein coupled receptor 161 (G-protein coupled receptor RE2) [Homo sapiens] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	215	1.2E-22	89%	9%	100%

gi\|73961399\|ref\|XP_547479.2\| PREDICTED: similar to G protein-coupled receptor 161 isoform 2 [Canis familiaris] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	210	4.40883E-22	85%	9%	100%