Xenopus tropicalis v4.1

Xenopus tropicalis v4.1

TRANSCRIPT ANNOTATION

Xentr4/scaffold_330:695573-708021 estExt_Genewise1.C_3300081 Hide

Attribute

Value

Creator

Action

Name

Description

Model Notes

Defline

Disposition

Literature

Assessment

?

Note

Creator

Action

EST evidence

Needs GO

Evidence

Type

Creator

Action

FUNCTIONAL (PROTEIN) ANNOTATION

User-Assigned Ontology

ASPECT

DETAILS

function

process

component

enzyme

kog

Automatic Ontology and Best Protein Alignments for transcript 280260

Automatic Ontology

ASPECT

GO/EC

SUPPORT

Action

High Scoring Alignments
gi\|49250569\|gb\|AAH74630.1\| MGC69555 protein [Xenopus tropicalis] >gi\|52345572\|ref\|NP_001004834.1\| MGC69555 protein [Xenopus tropicalis] >gi\|89268662\|emb\|CAJ83021.1\| novel protein [Xenopus tropicalis] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		1997	0.0	97%	100%	100%

gi\|62821774\|ref\|NP_898912.2\| defective in sister chromatid cohesion homolog 1 [Mus musculus] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		1478	0.0	68%	98%	99%

gi\|62652428\|ref\|XP_216934.3\| PREDICTED: similar to hypothetical protein MGC5528 [Rattus norvegicus] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		1474	0.0	69%	96%	99%

gi\|13129096\|ref\|NP_076999.1\| defective in sister chromatid cohesion homolog 1 [Homo sapiens] >gi\|12654937\|gb\|AAH01316.1\| Hypothetical protein MGC5528 [Homo sapiens] >gi\|37182850\|gb\|AAQ89225.1\| KRTR9337 [Homo sapiens] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		1468	1.7E-44	67%	100%	100%

gi\|16549155\|dbj\|BAB70767.1\| unnamed protein product [Homo sapiens] >gi\|16306709\|gb\|AAH01531.1\| DCC1 protein [Homo sapiens] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		1463	1.7E-44	67%	100%	100%

gi\|73974559\|ref\|XP_851311.1\| PREDICTED: similar to defective in sister chromatid cohesion homolog 1 [Canis familiaris] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		1460	0.0	67%	100%	100%

gi\|76635010\|ref\|XP_586552.2\| PREDICTED: similar to defective in sister chromatid cohesion homolog 1 [Bos taurus] [no tax name] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		1443	0.0	67%	100%	100%

rno:299933 LOC299933; similar to hypothetical protein MGC5528 [Rattus norvegicus] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		1430	0.0	68%	98%	99%

gi\|51859035\|gb\|AAH81483.1\| Zgc:103507 [Danio rerio] >gi\|52219070\|ref\|NP_001004611.1\| hypothetical protein LOC447872 [Danio rerio] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		1412	0.0	67%	99%	99%

gi\|68382949\|ref\|XP_689134.1\| PREDICTED: similar to defective in sister chromatid cohesion homolog 1 [Danio rerio] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		1410	0.0	67%	99%	99%