Xenopus tropicalis v4.1

TRANSCRIPT ANNOTATION

Xentr4/scaffold_1464:41762-45862 gw1.1464.7.1 Hide

Attribute

Value

Creator

Action

Name

Description

Model Notes

Defline

Disposition

Literature

Assessment

Note

Creator

Action

EST evidence

Needs GO

Evidence

Type

Creator

Action

FUNCTIONAL (PROTEIN) ANNOTATION

User-Assigned Ontology

ASPECT

DETAILS

function

process

component

enzyme

kog

Automatic Ontology and Best Protein Alignments for transcript 31495

Automatic Ontology

ASPECT

GO/EC

SUPPORT

Action

High Scoring Alignments
gi\|15236481\|ref\|NP_192578.1\| structural constituent of cell wall [Arabidopsis thaliana] >gi\|7267479\|emb\|CAB77963.1\| extensin-like protein [Arabidopsis thaliana] >gi\|5731759\|emb\|CAB52560.1\| extensin-like protein [Arabidopsis thaliana] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	585	1.00126E-9	18%	78%	98%

gi\|15222668\|ref\|NP_173949.1\| structural constituent of cell wall [Arabidopsis thaliana] >gi\|12321180\|gb\|AAG50682.1\| unknown protein [Arabidopsis thaliana] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	296	3.30396E-7	14%	79%	48%

ath:At4g08380 T28D5.70; proline-rich extensin-like family protein [Arabidopsis thaliana] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	284	2.0E-30	27%	76%	100%

gi\|330130\|gb\|AAA45797.1\| latency associated transcript (LAT) ORF-2 [Human herpesvirus 1] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	251	2.60824E-8	24%	24%	44%

gi\|50428115\|ref\|XP_457686.1\| hypothetical protein DEHA0B17017g [Debaryomyces hansenii CBS767] >gi\|49653351\|emb\|CAG85701.1\| unnamed protein product [Debaryomyces hansenii CBS767] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	251	3.78016E-7	22%	78%	46%

gi\|15236486\|ref\|NP_192580.1\| structural constituent of cell wall [Arabidopsis thaliana] >gi\|7267481\|emb\|CAB77965.1\| extensin-like protein [Arabidopsis thaliana] >gi\|5731761\|emb\|CAB52562.1\| extensin-like protein [Arabidopsis thaliana] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	236	2.25878E-6	19%	37%	76%

gi\|15236488\|ref\|NP_192581.1\| structural constituent of cell wall [Arabidopsis thaliana] >gi\|7267482\|emb\|CAB77966.1\| extensin-like protein [Arabidopsis thaliana] >gi\|5731762\|emb\|CAB52563.1\| extensin-like protein [Arabidopsis thaliana] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	236	1.88035E-6	16%	34%	76%

gi\|11357288\|pir\|\|T47618 extensin-like protein T14E10.160 [imported] - Arabidopsis thaliana view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	235	2.46808E-6	16%	33%	60%

gi\|15232553\|ref\|NP_191022.1\| ATHRGP1 (hydroxyproline-rich glycoprotein 1); structural constituent of cell wall [Arabidopsis thaliana] >gi\|7798990\|emb\|CAB77579.2\| extensin precursor-like protein [Arabidopsis thaliana] >gi\|21263625\|sp\|Q9M1G9\|EXTN2_ARATH Extensin-2 precursor (AtExt2) (Cell wall hydroxyproline-rich glycoprotein 1) (HRGP1) view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	235	2.46444E-6	16%	33%	60%

gi\|15233034\|ref\|NP_189496.1\| structural constituent of cell wall [Arabidopsis thaliana] >gi\|9294269\|dbj\|BAB02171.1\| unnamed protein product [Arabidopsis thaliana] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	235	2.78886E-6	19%	19%	56%