Xenopus tropicalis v4.1

Xenopus tropicalis v4.1

TRANSCRIPT ANNOTATION

Xentr4/scaffold_54:1371684-1384306 e_gw1.54.102.1 Hide

Attribute

Value

Creator

Action

Name

Description

Model Notes

Defline

Disposition

Literature

Assessment

?

Note

Creator

Action

EST evidence

Needs GO

Evidence

Type

Creator

Action

FUNCTIONAL (PROTEIN) ANNOTATION

User-Assigned Ontology

ASPECT

DETAILS

function

process

component

enzyme

kog

Automatic Ontology and Best Protein Alignments for transcript 319498

Automatic Ontology

ASPECT

GO/EC

SUPPORT

Action

High Scoring Alignments
gi\|89269918\|emb\|CAJ81881.1\| sin3-associated polypeptide, 30kDa [Xenopus tropicalis] [no tax name] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		861	0.0	100%	99%	99%

gi\|62860074\|ref\|NP_001016618.1\| sin3-associated polypeptide, 30kDa [Xenopus tropicalis] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		861	0.0	100%	100%	99%

gi\|51858971\|gb\|AAH82206.1\| MGC99111 protein [Xenopus laevis] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		840	0.0	96%	100%	99%

hsa:8819 SAP30; sin3-associated polypeptide, 30kDa [Homo sapiens] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		744	0.0	68%	100%	99%

gi\|50746493\|ref\|XP_420522.1\| PREDICTED: similar to sin3 associated polypeptide p30; sin3-associated polypeptide, 30kD [Gallus gallus] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		640	0.0	61%	60%	99%

dre:327079 zgc:77367 [Danio rerio] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		625	0.0	74%	87%	80%

gi\|55623530\|ref\|XP_526733.1\| PREDICTED: similar to sin3 associated polypeptide p30 [Pan troglodytes] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		612	0.0	63%	100%	99%

gi\|4506783\|ref\|NP_003855.1\| Sin3A-associated protein, 30kDa [Homo sapiens] >gi\|16876966\|gb\|AAH16757.1\| Sin3 associated polypeptide p30 [Homo sapiens] >gi\|68053249\|sp\|O75446\|SAP30_HUMAN Histone deacetylase complex subunit SAP30 (Sin3-associated polypeptide, 30 kDa) (Sin3 corepressor complex subunit SAP30) >gi\|3493211\|gb\|AAC33316.1\| mSin3A associated polypeptide p30 [Homo sapiens] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		611	0.0	63%	100%	99%

gi\|73993665\|ref\|XP_849083.1\| PREDICTED: similar to sin3 associated polypeptide p30 [Canis familiaris] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		611	0.0	63%	100%	99%

rno:360531 LOC360531; similar to hypothetical protein FLJ11526 [Rattus norvegicus] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		607	0.0	75%	69%	77%