Xenopus tropicalis v4.1

TRANSCRIPT ANNOTATION

Xentr4/scaffold_122:708152-728145 e_gw1.122.131.1 Hide

Attribute

Value

Creator

Action

Name

Description

Model Notes

Defline

Putative ortholog of concentrative Na+-nucleoside cotransporter mCNT3, 1 of 1

Daniel Rokhsar

Disposition	Catalog	AUTOMATIC
	tentative	Daniel Rokhsar

Literature

Assessment

Note

Creator

Action

EST evidence

Needs GO

Evidence

Type

Creator

Action

FUNCTIONAL (PROTEIN) ANNOTATION

User-Assigned Ontology

ASPECT

DETAILS

function

process

component

enzyme

kog

KOG3747
Concentrative Na+-nucleoside cotransporter CNT1/CNT2

NULL

ISS

NULL

e_gw1.122.131.1

Daniel Rokhsar

Automatic Ontology and Best Protein Alignments for transcript 334566

Automatic Ontology

ASPECT

GO/EC

SUPPORT

Action

function

5415 Catalysis of the reaction: nucleoside(out) + Na+(out) = nucleoside(in) + Na+(in).	IPR008276 Concentrative nucleoside transporter
	IPR002668 Na+ dependent nucleoside transporter

process

6810 The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells.	IPR008276 Concentrative nucleoside transporter
	IPR002668 Na+ dependent nucleoside transporter

component

16020 Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.	IPR002668 Na+ dependent nucleoside transporter
	IPR008276 Concentrative nucleoside transporter

High Scoring Alignments
rno:140944 Slc28a3; solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 [KO:K03317] [Rattus norvegicus] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	2179	0.0	67%	85%	98%

Hs11545853 [none] view alignment
GO/EC Classification	Score	Evalue	% id	% target	% model
	2138	0.0	66%	87%	98%

gi\|73946593\|ref\|XP_849604.1\| PREDICTED: similar to concentrative Na+-nucleoside cotransporter [Canis familiaris] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	2022	0.0	65%	93%	98%

gi\|18266722\|ref\|NP_543184.1\| solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 [Rattus norvegicus] >gi\|17127741\|gb\|AAL27091.1\| concentrative Na+-nucleoside cotransporter protein [Rattus norvegicus] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	1998	0.0	63%	85%	98%

gi\|10732817\|gb\|AAG22552.1\| concentrative Na+-nucleoside cotransporter mCNT3 [Mus musculus] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	1973	0.0	62%	86%	98%

gi\|74203052\|dbj\|BAE26226.1\| unnamed protein product [Mus musculus] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	1972	0.0	62%	86%	98%

gi\|26342977\|dbj\|BAC35145.1\| unnamed protein product [Mus musculus] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	1968	0.0	62%	86%	98%

gi\|15489379\|gb\|AAH13783.1\| Solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 [Mus musculus] >gi\|14714664\|gb\|AAH10472.1\| Solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 [Mus musculus] >gi\|31543723\|ref\|NP_071712.2\| solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 [Mus musculus] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	1966	0.0	62%	86%	98%

gi\|11545853\|ref\|NP_071410.1\| concentrative Na+-nucleoside cotransporter [Homo sapiens] >gi\|62739877\|gb\|AAH93821.1\| Concentrative Na+-nucleoside cotransporter [Homo sapiens] >gi\|55662956\|emb\|CAH73162.1\| solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 [Homo sapiens] >gi\|55958665\|emb\|CAI16332.1\| solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 [Homo sapiens] >gi\|62739538\|gb\|AAH93823.1\| Concentrative Na+-nucleoside cotransporter [Homo sapiens] >gi\|10732815\|gb\|AAG22551.1\| concentrative Na+-nucleoside cotransporter hCNT3 [Homo sapiens] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	1946	0.0	63%	87%	98%

gi\|50762372\|ref\|XP_425033.1\| PREDICTED: similar to concentrative Na+-nucleoside cotransporter [Gallus gallus] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	1923	0.0	56%	89%	98%