Xenopus tropicalis v4.1

TRANSCRIPT ANNOTATION

Xentr4/scaffold_229:964509-987416 e_gw1.229.3.1 Hide

Attribute

Value

Creator

Action

Name

Description

Model Notes

Defline

Disposition

Literature

Assessment

Note

Creator

Action

EST evidence

Needs GO

Evidence

Type

Creator

Action

FUNCTIONAL (PROTEIN) ANNOTATION

User-Assigned Ontology

ASPECT

DETAILS

function

process

component

enzyme

kog

Automatic Ontology and Best Protein Alignments for transcript 352385

Automatic Ontology

ASPECT

GO/EC

SUPPORT

Action

function

5509 Interacting selectively with calcium ions (Ca2+).

IPR001881 EGF-like calcium-binding

High Scoring Alignments
gi\|38648935\|gb\|AAH63189.1\| Hypothetical protein MGC75573 [Xenopus tropicalis] >gi\|45361289\|ref\|NP_989222.1\| hypothetical protein LOC394830 [Xenopus tropicalis] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	2408	0.0	53%	81%	97%

rno:298031 LOC298031; similar to bA4O1.1 (novel protein) [Rattus norvegicus] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	1081	0.0	38%	89%	99%

gi\|50762021\|ref\|XP_424913.1\| PREDICTED: similar to sushi domain containing 1 [Gallus gallus] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	962	0.0	30%	74%	70%

gi\|76669472\|ref\|XP_597051.2\| PREDICTED: similar to sushi domain containing 1, partial [Bos taurus] [no tax name] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	933	9.35952E-26	24%	83%	92%

gi\|73971958\|ref\|XP_538789.2\| PREDICTED: similar to sushi domain containing 1 [Canis familiaris] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	932	2.74525E-27	24%	93%	96%

gi\|82893439\|ref\|XP_914640.1\| PREDICTED: similar to sushi domain containing 1 [Mus musculus] [no tax name] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	900	1.25418E-32	23%	85%	96%

gi\|73909146\|gb\|AAH60770.2\| SUSD1 protein [Homo sapiens] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	895	3.36897E-38	23%	88%	96%

gi\|42476320\|ref\|NP_071931.2\| sushi domain containing 1 [Homo sapiens] >gi\|37182611\|gb\|AAQ89106.1\| GRGP2438 [Homo sapiens] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	895	4.28134E-38	23%	89%	96%

gi\|55957871\|emb\|CAI12347.1\| RP11-4O1.1 [Homo sapiens] >gi\|66347380\|emb\|CAI95299.1\| RP11-4O1.1 [Homo sapiens] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	895	4.10787E-38	23%	90%	96%

gi\|55957872\|emb\|CAI12348.1\| RP11-4O1.1 [Homo sapiens] >gi\|66347381\|emb\|CAI95300.1\| RP11-4O1.1 [Homo sapiens] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	894	3.17989E-38	23%	94%	96%