Xenopus tropicalis v4.1

TRANSCRIPT ANNOTATION

Xentr4/scaffold_37:927744-952274 estExt_fgenesh1_pg.C_370027 Hide

Attribute

Value

Creator

Action

Name

Description

Model Notes

Defline

Disposition

Literature

Assessment

Note

Creator

Action

EST evidence

Needs GO

Evidence

Type

Creator

Action

FUNCTIONAL (PROTEIN) ANNOTATION

User-Assigned Ontology

ASPECT

DETAILS

function

process

component

enzyme

kog

Automatic Ontology and Best Protein Alignments for transcript 450011

Automatic Ontology

ASPECT

GO/EC

SUPPORT

Action

function

5525 Interacting selectively with GTP, guanosine triphosphate.

IPR001806 Ras GTPase

process

7264 Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.

IPR001806 Ras GTPase

High Scoring Alignments
rno:299012 LOC299012; similar to p190-B [Rattus norvegicus] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	6197	0.0	78%	100%	100%

gi\|54038442\|gb\|AAH84299.1\| LOC495117 protein [Xenopus laevis] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	5930	0.0	94%	97%	80%

mmu:11855 Arhgap5; Rho GTPase activating protein 5 [Mus musculus] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	5882	0.0	75%	100%	100%

gi\|46397677\|sp\|P97393\|RHG05_MOUSE Rho-GTPase-activating protein 5 (p190-B) [Mus musculus] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	5882	0.0	75%	100%	100%

hsa:394 ARHGAP5; Rho GTPase activating protein 5 [Homo sapiens] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	5866	0.0	76%	100%	100%

gi\|46397678\|sp\|Q13017\|RHG05_HUMAN Rho-GTPase-activating protein 5 (p190-B) [Homo sapiens] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	5866	0.0	76%	100%	100%

gi\|50749000\|ref\|XP_426439.1\| PREDICTED: similar to Rho GTPase activating protein 5; RhoGAP5; p190-B [Gallus gallus] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	5683	7.91409E-24	69%	97%	97%

gi\|73962685\|ref\|XP_850368.1\| PREDICTED: similar to Rho GTPase activating protein 5 isoform a isoform 1 [Canis familiaris] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	5673	6.44607E-25	69%	97%	97%

gi\|71834861\|ref\|NP_001164.2\| Rho GTPase activating protein 5 isoform b [Homo sapiens] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	5670	6.42085E-25	69%	97%	97%

gi\|71834863\|ref\|NP_001025226.1\| Rho GTPase activating protein 5 isoform a [Homo sapiens] view alignment view info
GO/EC Classification	Score	Evalue	% id	% target	% model
	5670	6.42108E-25	69%	97%	97%