Xenopus tropicalis v4.1
TRANSCRIPT ANNOTATION 
Xentr4/scaffold_41:2761146-2812416 estExt_fgenesh1_pg.C_410107 Hide 
AttributeValueCreatorAction
Name  
Description  
Model Notes  
Defline  
DispositionCatalogAUTOMATIC 
Literature  
Assessment
 ? 
NoteCreatorAction
EST evidence  
Needs GO  
EvidenceTypeCreatorAction
 

FUNCTIONAL (PROTEIN) ANNOTATION
User-Assigned Ontology       
ASPECT DETAILS
function
      
process
      
component
      
enzyme
      
kog
      
Automatic Ontology and Best Protein Alignments for transcript 450244
Automatic Ontology
ASPECT
GO/ECSUPPORTAction
function
16491  Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.IPR002347  Glucose/ribitol dehydrogenase 
 IPR002198  Short-chain dehydrogenase/reductase SDR 
4197  Catalysis of the hydrolysis of nonterminal peptide linkages in oligopeptides or polypeptides; a cysteine residue is at the active center.IPR000169  Peptidase, eukaryotic cysteine peptidase active site 
process
6508  Destruction of a protein or peptide by hydrolysis of peptide bonds.IPR000169  Peptidase, eukaryotic cysteine peptidase active site 
8152  Processes that cause many of the chemical changes in living organisms, including anabolism and catabolism. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.IPR002198  Short-chain dehydrogenase/reductase SDR 
 IPR002347  Glucose/ribitol dehydrogenase 
 IPR002198  Short-chain dehydrogenase/reductase SDR 
kog
KOG1205  Predicted dehydrogenase
Secondary metabolites biosynthesis, transport and catabolism
  

High Scoring Alignments 

gi|33305277|gb|AAQ02772.1|
short-chain dehydrogenase/reductase [Gallus gallus] >gi|45383153|ref|NP_989838.1| short-chain dehydrogenase/reductase [Gallus gallus] >gi|82207001|sp|Q71R50|DHR11_CHICK Dehydrogenase/reductase SDR family member 11 precursor

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
1214
0.0
91%
100%
100%

gi|89273765|emb|CAJ82098.1|
Novel protein containing short chain dehydrogenase domain [Xenopus tropicalis]  [no tax name]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
1077
0.0
83%
99%
99%

gi|37182545|gb|AAQ89074.1|
ARPG836 [Homo sapiens] >gi|74749397|sp|Q6UWP2|DHR11_HUMAN Dehydrogenase/reductase SDR family member 11 precursor

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
1072
0.0
79%
98%
100%

gi|55670856|pdb|1XG5|D
Chain D, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp >gi|55670855|pdb|1XG5|C Chain C, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp >gi|55670854|pdb|1XG5|B Chain B, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp >gi|55670853|pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp  [Homo sapiens]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
1058
0.0
79%
90%
98%

rno:360583
LOC360583; similar to Hypothetical protein MGC18716  [Rattus norvegicus]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
1056
0.0
77%
98%
100%

gi|56206125|emb|CAI24984.1|
novel protein [Mus musculus]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
1054
0.0
77%
100%
100%

gi|74152386|dbj|BAE33942.1|
unnamed protein product [Mus musculus] >gi|85542060|sp|Q3U0B3|DHR11_MOUSE Dehydrogenase/reductase SDR family member 11 precursor

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
1054
0.0
77%
98%
100%

gi|47223768|emb|CAF98538.1|
unnamed protein product [Tetraodon nigroviridis]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
1053
0.0
83%
55%
95%

gi|73587197|gb|AAI03082.1|
Hypothetical protein LOC510264 [Bos taurus] >gi|85542059|sp|Q3ZBV9|DHR11_BOVIN Dehydrogenase/reductase SDR family member 11 precursor >gi|78045527|ref|NP_001030260.1| hypothetical protein LOC510264 [Bos taurus]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
1047
0.0
77%
100%
100%

gi|57091781|ref|XP_548249.1|
PREDICTED: similar to short-chain dehydrogenase/reductase isoform 1 [Canis familiaris]

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GO/EC Classification
Score
Evalue
% id
% target
% model
 
1046
0.0
77%
93%
99%