Xenopus tropicalis v4.1

Xenopus tropicalis v4.1

TRANSCRIPT ANNOTATION

Xentr4/scaffold_143:651596-655973 estExt_fgenesh1_pg.C_1430021 Hide

Attribute

Value

Creator

Action

Name

Description

Model Notes

Defline

Disposition

Literature

Assessment

?

Note

Creator

Action

EST evidence

Needs GO

Evidence

Type

Creator

Action

FUNCTIONAL (PROTEIN) ANNOTATION

User-Assigned Ontology

ASPECT

DETAILS

function

process

component

enzyme

kog

Automatic Ontology and Best Protein Alignments for transcript 453221

Automatic Ontology

ASPECT

GO/EC

SUPPORT

Action

High Scoring Alignments
gi\|62859137\|ref\|NP_001016187.1\| hypothetical protein LOC548941 [Xenopus tropicalis] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		669	0.0	100%	91%	70%

gi\|52430504\|gb\|AAH82939.1\| LOC494828 protein [Xenopus laevis] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		631	0.0	93%	91%	70%

rno:297415 LOC297415; similar to RIKEN cDNA 2010309E21 [Rattus norvegicus] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		562	0.0	75%	100%	77%

gi\|27712200\|ref\|XP_216186.1\| PREDICTED: similar to RIKEN cDNA 2010309E21 [Rattus norvegicus] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		534	0.0	78%	91%	70%

gi\|73970267\|ref\|XP_855482.1\| PREDICTED: similar to CG5323-PA [Canis familiaris] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		532	0.0	78%	73%	70%

gi\|74353440\|gb\|AAI03776.1\| Hypothetical protein LOC66488 [Mus musculus] >gi\|23272276\|gb\|AAH24049.1\| RIKEN cDNA 2010309E21 [Mus musculus] >gi\|71059689\|emb\|CAJ18388.1\| 2010309E21Rik [Mus musculus] >gi\|74190041\|dbj\|BAE24632.1\| unnamed protein product [Mus musculus] >gi\|12842801\|dbj\|BAB25737.1\| unnamed protein product [Mus musculus] >gi\|12837726\|dbj\|BAB23928.1\| unnamed protein product [Mus musculus] >gi\|13385042\|ref\|NP_079867.1\| hypothetical protein LOC66488 [Mus musculus] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		525	0.0	76%	91%	70%

gi\|55596666\|ref\|XP_515532.1\| PREDICTED: similar to Hypothetical protein FLJ14668 [Pan troglodytes] >gi\|15929034\|gb\|AAH14975.1\| Hypothetical protein LOC84908 [Homo sapiens] >gi\|62702184\|gb\|AAX93110.1\| unknown [Homo sapiens] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		521	0.0	75%	91%	70%

gi\|15489002\|gb\|AAH13621.1\| 2010309E21Rik protein [Mus musculus] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		520	0.0	76%	91%	70%

gi\|14249520\|ref\|NP_116211.1\| hypothetical protein LOC84908 [Homo sapiens] >gi\|14042346\|dbj\|BAB55208.1\| unnamed protein product [Homo sapiens] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		519	0.0	75%	91%	70%

gi\|76681074\|ref\|XP_874259.1\| PREDICTED: similar to CG5323-PA [Bos taurus] >gi\|88682863\|gb\|AAI05350.1\| Unknown (protein for MGC:127625) [Bos taurus] [no tax name] view alignment view info
GO/EC Classification		Score	Evalue	% id	% target	% model
		519	0.0	76%	91%	70%