Xenopus tropicalis v4.1

TRANSCRIPT ANNOTATION

Xentr4/scaffold_279:1225787-1232098 estExt_fgenesh1_pg.C_2790041 Hide

Attribute

Value

Creator

Action

Name

Description

Model Notes

Defline

Disposition

Literature

Assessment

Note

Creator

Action

EST evidence

Needs GO

Evidence

Type

Creator

Action

FUNCTIONAL (PROTEIN) ANNOTATION

User-Assigned Ontology

ASPECT

DETAILS

function

process

component

enzyme

kog

Automatic Ontology and Best Protein Alignments for transcript 455663

Automatic Ontology

ASPECT

GO/EC

SUPPORT

Action

component

5777 A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2).

IPR006708 Pex19 protein

High Scoring Alignments

gi|62026746|gb|AAH92106.1|
Unknown (protein for IMAGE:6951607) [Xenopus laevis]

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GO/EC Classification

Score

Evalue

% id

% target

% model

1118

0.0

91%

93%

92%

gi|56269259|gb|AAH87526.1|
LOC496096 protein [Xenopus laevis]

view alignment view info

GO/EC Classification

Score

Evalue

% id

% target

% model

1106

1.97656E-17

87%

92%

91%

gi|3024491|sp|Q60415|PEX19_CRIGR
Peroxisomal biogenesis factor 19 (Peroxin-19) (Peroxisomal farnesylated protein) [Cricetulus griseus]

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GO/EC Classification

Score

Evalue

% id

% target

% model

5777: A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2).

1086

0.0

74%

96%

98%

gi|62903182|sp|Q9QYU1|PEX19_RAT
Peroxisomal biogenesis factor 19 (Peroxin-19) (Peroxisomal farnesylated protein) [Rattus norvegicus]

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GO/EC Classification

Score

Evalue

% id

% target

% model

1081

0.0

74%

97%

99%

hsa:5824
PEX19, PXF; peroxisomal biogenesis factor 19 [Homo sapiens]

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GO/EC Classification

Score

Evalue

% id

% target

% model

1080

0.0

74%

96%

98%

gi|729723|sp|P40855|PEX19_HUMAN
Peroxisomal biogenesis factor 19 (Peroxin-19) (Peroxisomal farnesylated protein) (33 kDa housekeeping protein) [Homo sapiens]

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GO/EC Classification

Score

Evalue

% id

% target

% model

BP	7031: The assembly and arrangement of a peroxisome.
CC	16021: Penetrating at least one phospholipid bilayer of a membrane. Also refers to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence spans the membrane.
CC	5777: A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2).
CC	5778: The lipid bilayer surrounding a peroxisome.

1080

0.0

74%

96%

98%

rno:307259
LOC307259; similar to PxF protein [Rattus norvegicus]

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GO/EC Classification

Score

Evalue

% id

% target

% model

1078

0.0

73%

80%

99%

gi|62903494|sp|Q8VCI5|PEX19_MOUSE
Peroxisomal biogenesis factor 19 (Peroxin-19) (Peroxisomal farnesylated protein) (PxF) [Mus musculus]

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GO/EC Classification

Score

Evalue

% id

% target

% model

1059

0.0

72%

96%

98%

mmu:19298
Pex19; peroxisome biogenesis factor 19 [Mus musculus]

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GO/EC Classification

Score

Evalue

% id

% target

% model

1051

0.0

72%

96%

98%

rno:364900
LOC364900; similar to Hypothetical protein KIAA0427 [Rattus norvegicus]

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GO/EC Classification

Score

Evalue

% id

% target

% model

1036

0.0

73%

30%

95%