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Name:
estExt_fgenesh1_pm.C_120002
Protein ID:
296494
Location:
scaffold_12:945198-948915
Strand:
+
Number of exons:
5
Description:
Metazome:
No data available
Best Hit:
gi|23503104|sp|Q9Y606|TRUA_HUMAN tRNA pseudouridine synthase A (tRNA-uridine isomerase I) (tRNA pseudouridylate synthase I)
(model%: 89, hit%: 45, score: 1421, %id: 73) [Homo sapiens]
total hits(shown)
146 (10)
ASPECT
GO Id
GO Desc
Interpro Id
Interpro Desc
Molecular Function
0004730
pseudouridylate synthase activity
IPR001406
tRNA pseudouridine synthase
Biological Process
0008033
tRNA processing
IPR001406
tRNA pseudouridine synthase
View/modify manual annotation
View nucleotide and 3-frame translation
   
To Genome Browser
NCBI blastp
     
Predicted number of transmembrane domains: 0
Get Sequence
--All Sequences--
estExt_fgenesh1_pm.C_120002
Swissprot_23503104 TRUA_HUMAN tRNA pseudouridine synthase A (tRNA-uridine isomerase I) (tRNA pseudouridylate synthase I)
Swissprot_8134771 TRUA_MOUSE tRNA pseudouridine synthase A (tRNA-uridine isomerase I) (tRNA pseudouridylate synthase I)
KEGG_rno:304567 rno:304567 LOC304567; similar to pseudouridine synthase 1
nr_b_b_4455035 pseudouridine synthase 1 [Homo sapiens]
nr_b_b_70166634 TRUA_HUMAN tRNA pseudouridine synthase A (tRNA-uridine isomerase I) (tRNA pseudouridylate synthase I)
nr_b_b_70166645 unknown [Homo sapiens]
nr_b_b_50756277 PREDICTED: similar to tRNA pseudouridine synthase A (Pseudouridylate synthase I) (Pseudouridine synthase I) (Uracil hydrol
nr_b_b_70906470 pseudouridine synthase 1 isoform 2 [Mus musculus]
nr_b_b_11464733 pseudouridine synthase 1 [Mus musculus]
nr_b_b_70906468 pseudouridine synthase 1 isoform 1 [Mus musculus]
1
Taxonomy
Database
Hits
----------------------------------------
Anopheles gambiae str. PEST
Apis mellifera
Aquifex aeolicus
Arabidopsis thaliana
Ashbya gossypii ATCC 10895
Aspergillus fumigatus Af293
Aspergillus nidulans FGSC A4
Bacillus anthracis
Bacillus cereus ATCC 10987
Bacillus cereus ATCC 14579
Bacillus cereus E33L
Bacillus sp. KSM-64
Bacillus thuringiensis serovar konkukian
Borrelia burgdorferi
Borrelia garinii
Buchnera aphidicola (Schizaphis graminum)
Caenorhabditis briggsae
Caenorhabditis elegans
Candida albicans SC5314
Candida glabrata CBS138
Canis familiaris
Chlorobaculum tepidum
Clostridium perfringens
Clostridium tetani
Cryptococcus neoformans var. neoformans B-3501A
Cryptococcus neoformans var. neoformans JEC21
Cyanidioschyzon merolae
Danio rerio
Desulfotalea psychrophila
Dictyostelium discoideum
Drosophila melanogaster
Drosophila pseudoobscura
Encephalitozoon cuniculi
Eremothecium gossypii
Escherichia coli
Francisella tularensis subsp. tularensis
Fusobacterium nucleatum subsp. nucleatum
Gallus gallus
Geobacillus kaustophilus
Gibberella zeae PH-1
Haemophilus influenzae
Haloarcula marismortui
Homo sapiens
Kluyveromyces lactis NRRL Y-1140
Leptospira interrogans
Mannheimia succiniciproducens MBEL55E
Mesoplasma florum
Methanocaldococcus jannaschii
Methanosarcina acetivorans
Methanosarcina mazei
Methanothermobacter thermautotrophicus str. Delta H
Mus musculus
Mycoplasma mycoides subsp. mycoides SC
Myxococcus xanthus
Nitrosomonas europaea
no tax name
Nostoc sp. PCC 7120
Oceanobacillus iheyensis
Onion yellows phytoplasma
Oryza sativa (japonica cultivar-group)
Parachlamydia sp. UWE25
Pirellula sp.
Plasmodium falciparum 3D7
Prochlorococcus marinus str. MIT 9313
Pseudomonas aeruginosa
Pyrococcus abyssi
Pyrococcus furiosus
Pyrococcus horikoshii
Ralstonia solanacearum
Rattus norvegicus
Saccharomyces cerevisiae
Salmonella typhi
Schistosoma japonicum
Schizosaccharomyces pombe
Schizosaccharomyces pombe 972h-
Staphylococcus aureus subsp. aureus COL
Staphylococcus aureus subsp. aureus N315
Streptococcus mutans
Strongylocentrotus purpuratus
Synechococcus elongatus
Synechocystis sp. PCC 6803
Tetraodon nigroviridis
Thermococcus kodakarensis KOD1
Thermotoga maritima
Thermus thermophilus HB27
Treponema denticola
Ustilago maydis 521
Vibrio cholerae
Vibrio parahaemolyticus
Xenopus laevis
Yarrowia lipolytica CLIB99
KEGG
KEGGeuk200410
KEGGeuk200510
KOG
nr_b_b
Swissprot
Align Width
Rt Margin