JGI Microbial Genomics

Microbes

Finished genomes are highlighted in green. Draft genomes are highlighted in white.


Acidiphilium cryptum JF-5	Acidobacteria bacterium Ellin345	Acidothermus cellulolyticus 11B	Actinovorax avenae subsp. citrulli AAC00-1	Acidovorax sp. JS42	Actinobacillus succinogenes 130Z	Akkermansia muciniphila ATCC BAA-835
Alkalilimnicola ehrlichei MLHE-1	Alkaliphillus metalliredigens QYMF	Alkaliphilus oremlandii OhILAs	Anabaena variabilis ATTCC 29413	Anaeromyxobacter dehalogenans 2CP-1	Anaeromyxobacter dehalogenans 2CP-C	Anaeromyxobacter sp. Fw109-5
Anaeromyxobacter sp. K	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24	Azotobacter vinelandii AvOP	Bacillus anthracis Sterne	Bacillus cereus E33L	Bacillus cereus subsp. cytotois NVH 391-98
Bacillus coagulans 36D1	Bacillus selenitireducens MLS10	Bacillus thuringiensis Al Hakam	Bacillus thuringiensis serovar konkukian 97-27	Bacillus weihenstephanensis KBAB4	bacterium Ellin514	Beijerinckia indica subsp. indica ATCC 9039
Bifidobacterium longum DJO10A	Bradyrhizobium sp. BTAi1	Brevibacterium linens BL2	Brucella canis ATCC 23365	Brucella suis ATCC 23445	Burkholderia ambifaira IOP40-10	Burkholderia ambifaira MC40-6
Burkholderia ambifaira MEX-5	Burkholderia cepacia AMMD	Burkholderia cenocepacia AU 1054	Burkholderia cenocepacia HI2424	Burkholderia cenocepacia MC0-3	Burkholderia graminis C4D1M	Burkholderia multivorans ATCC 17616
Burkholderia phymatum STM815	Burkholderia phytofirmans PsJN	Burkholderia sp. 383	Burkholderia vietnamiensis G4	Burkholderia xenovorans LB400	Caldicellulosiruptor saccharolyticus DSM 8903	Caldivirga maquilingensis IC-167
Candidatus Amoebophilus asiaticus 5a2	Candidatus Desulforudis audaxviator MP104C	Candidatus Korarchaeum cryptofilum OPF8	Candidatus Methanoregula boonei 6A8	Candidatus Ruthia magnifica Cm	Caulobacter sp. K31	Chlorobium chlorochromatii CaD3
Chlorobium ferrooxidans DSM 13031	Chlorobium limicola DSM 245	Chlorobium luteolum DSM 273	Chlorobium phaeobacteroides BS1	Chlorobium phaeobacteroides DSM 266	Chloroflexus aggregans DSM 9485	Chloroflexus aurantiacus J-10-fl
Chloroflexus sp. Y-400-fl	Chromohalobacter salexigens DSM 3043	Clostridium beijerincki NCIMB 8052	Clostridium cellulolyticum H10	Clostridium phytofermentans ISDg	Clostridium thermocellum ATCC 27405	Comamonas testosteroni KF-1
Crocosphaera watsonii WH 8501	Cupriavidus metallidurans CH34	Cyanothece sp. PCC 7424	Cyanothece sp. PCC 8801	Cytophaga hutchinsonii ATCC 33406	Dechloromonas aromatica RCB	Dehalococcoides sp. BAV1
Dehalococcoides sp. VS	Deinococcus geothermalis DSM 11300	Delftia acidovorans SPH-1	Desulfatibacillum alkenivorans AK-01	Desulfitobacterium halfniense DCB-2	Desulfococcus oleovorans Hxd3	Desulfotomaculum reducens MI-1
Desulfovibrio desulfuricans G20	Desulfovibrio vulgaris subsp. vulgaris DP4	Desulfuromonas acetoxidans DSM 684	Dinoroseobacter shibae DFL 12	Ehrlichia canis Jake	Ehrlichia chaffeensis Sapulpa	Elusimicrobium minutum Pei191
Enterococcus faecium DO	Enterobacter sp. 638	Escherichia coli C str. ATCC 8739	Exiguobacterium sibiricum 255-15	Exiguobacterium sp. AT1b	Ferroplasma acidarmanus fer1	Fervidobacterium nodosum Rt17-B1
Flavobacterium johnsoniae UW101	Francisella philomiragia subsp. philomiragia ATCC 25017	Frankia sp. CcI3	Frankia sp. EAN1pec	Geobacillus sp. WCH70	Geobacter bemidjiensis Bem	Geobacter lovleyi SZ
Geobacter metallireducens GS-15	Geobacter uraniireducens RF4	Geobacter sp. FRC-32	Geobacter sp. M21	Gluconacetobacter diazotrophicus PAl 5	Haemophilus somnus 129PT	Haemophilus somnus 2336
Halorhodospira halophila SL1	Halorubrum lacusprofundi ATCC 49239	Halothermothrix orenii H 168	Herpetosiphon aurantiacus ATCC 23779	Hydrogenobaculum sp. Y04AAS1	Ignicoccus hospitalis KIN4/I	Jannaschia sp. CCS1
Kineococcus radiotolerans SRS30216	Lactobacillus brevis ATCC 367	Lactobacillus casei ATCC 334	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	Lactobacillus gasseri ATCC 33323	Lactobacillus reuteri F275	Lactobacillus reuteri 100-23
Lactococcus lactis subsp. cremoris SK11	Leptothrix cholodnii SP-6	Leuconostoc mesenteroides ATCC 8293	Magnetococcus sp. MC-1	Magnetospirillum magnetotacticum MS-1	Maricaulis maris MCS10	Marinobacter aqueolei VT8
Marinomonas sp. MWYL1	Mesorhizobium sp. BNC1	Metallosphaera sedula DSM 5348	Methanococcoides burtonii DSM 6242	Methanococcus aeolicus Nankai-3	Methanococcus maripaludis C5	Methanococcus maripaludis C6
Methanococcus maripaludis C7	Methanococcus vannielii SB	Methanococcus voltae A3	Methanocorpusculum labreanum Z	Methanoculleus marisnigri JR1	Methanosaeta thermophila PT	Methanosarcina barkeri fusaro
Methanospirillum hungatei JF-1	Methylibium petroleiphilum PM1	Methylobacillus flagellatus KT	Methylobacterium chloromethanicum CM4	Methylobacterium extorquens PA1	Methylobacterium nodulans ORS 2060	Methylobacterium populi BJ001
Methylobacterium radiotolerans JCM 2831	Methylobacterium sp. 4-46	Methylocella silvestris BL2	Micrococcus luteus NCTC 2665	Mono Lake Deltaproteobacter MLMS-1	Moorella thermoacetica ATCC 39073	Mycobacterium gilvum PYR-GCK
Mycobacterium vanbaalenii PYR-1	Mycobacterium sp. JLS	Mycobacterium sp. KMS	Mycobacterium sp. MCS	Natranaerobius thermophilus JW/NM-WN-LF	Nitrobacter hamburgensis X14	Nitrobacter winogradskyi Nb-255
Nitrosococcus oceani ATCC 19707	Nitrosomonas europaea ATCC 19718	Nitrosomonas eutropha C91	Nitrosopumilus maritimus SCM1	Nitrosospira multiformis ATCC 25196	Nocardioides sp. JS614	Nostoc punctiforme ATCC 29133
Novosphingobium aromaticivorans DSM 12444	Ochrobactrum anthropi ATCC 49188	Oenococcus oeni PSU-1	Opitutaceae bacterium TAV2	Opitutus terrae PB90-1	Paenibacillus sp. JDR-2	Paracoccus denitrificans PD1222
Parvibaculum lavamentivorans DS-1	Pediococcus pentosaceus ATCC 25745	Pelobacter carbinolicus DSM 2380	Pelobacter propionicus DSM 2379	Pelodictyon phaeoclathratiforme BU-1	Petrotoga mobilis SJ95	Polaromonas napthalenivorans CJ2
Polaromonas sp. JS666	Polynucleobacter necessarius STIR1	Polynucleobacter sp. QLW-P1DMWA-1	Prochlorococcus marinus MED4	Prochlorococcus marinus str. MIT 9215	Prochlorococcus marinus str. MIT 9312	Prochlorococcus marinus str. MIT 9313
Prochlorococcus marinus NATL2A	Prosthecochloris aestuarii DSM 271	Prosthecochloris vibrioformis DSM 265	Pseudoalteromonas atlantica T6c	Pseudomonas fluorescens PfO-1	Pseudomonas mendocina ymp	Pseudomonas putida F1
Pseudomonas putida GB-1	Pseudomonas putida W619	Pseudomonas syringae pv. syringae B728a	Psychrobacter arcticus 273-4	Psychrobacter cryohalolentis K5	Psychrobacter sp. PRwf-1	Psychromonas ingrahamii 37
Pyrobaculum arsenaticum DSM 13514	Pyrobaculum calidifontis JCM 11548	Pyrobaculum islandicum DSM 4184	Ralstonia eutropha JMP134	Ralstonia pickettii 12D	Ralstonia pickettii 12J	Rhizobium leguminosarum bv. trifolii WSM1325
Rhizobium leguminosarum bv. trifolii WSM2304	Rhodoferax ferrireducens DSM 15236	Rhodobacter sphaeroides 2.4.1	Rhodobacter sphaeroides ATCC 17025	Rhodobacter sphaeroides ATCC 17029	Rhodopseudomonas palustris BisA53	Rhodopseudomonas palustris BisB5
Rhodopseudomonas palustris BisB18	Rhodopseudomonas palustris CGA009	Rhodopseudomonas palustris HaA2	Rhodopseudomonas palustris TIE-1	Rhodospirillum rubrum ATCC 11170	Roseiflexus castennolzii HLO8	Roseiflexus sp. RS-1
Rubrobacter xylanophilus DSM 9941	Saccharophagus degradans 2-40	Salinispora arenicola CNS205	Salinispora tropica CNB-440	Serratia proteamaculans 568	Shewanella amazonensis SB2B	Shewanella baltica OS155
Shewanella baltica OS185	Shewanella baltica OS195	Shewanella baltica OS223	Shewanella denitrificans OS217	Shewanella frigidimarina NCIMB 400	Shewanella halifaxensis HAW-EB4	Shewanella loihica PV-4
Shewanella pealeana ATCC 700345	Shewanella putrefaciens CN-32	Shewanella putrefaciens 200	Shewanella sediminis HAW-EB3	Shewanella woodyi ATCC 51908	Shewanella sp. ANA-3	Shewanella sp. MR-4
Shewanella sp. MR-7	Shewanella sp. W3-18-1	Silicibacter sp. TM1040	Sinorhizobium medicae WSM419	Solibacter usitatus Ellin6076	Sphingomonas wittichii RW1	Sphingopyxis alaskensis RB2256
Staphylococcus aureus subsp. aureus JH1	Staphylococcus aureus subsp. aureus JH9	Staphylothermus marinus F1	Stenotrophomonas maltophilia R551-3	Streptococcus suis 89/1591	Streptococcus thermophilus LMD-9	Sulfolobus islandicus L.D.8.5
Sulfolobus islandicus M.16.4	Sulfolobus islandicus U.3.28	Sulfolobus islandicus Y.G.57.14	Sulfolobus islandicus Y.N.51,15	Sulfurihydrogenibium sp. YO3AOP1	Sulfurimonas denitrificans DSM 1251	Synechococcus sp. CC9605
Synechococcus sp. CC9902	Synechococcus sp. PCC 7942	Synechococcus sp. WH8102	Syntrophobacter fumaroxidans MPOB	Syntrophomonas wolfei subsp. wolfei Goettingen	Thauera sp. MZ1T	Thermoanaerobacter sp. X514
Thermoanaerobacter pseudethanolicus 39E	Thermobidifa fusca YX	Thermofilum pendens Hrk 5	Thermoproteus neutrophilus V24Sta	Thermosinus carboxydivorans Nor1	Thermosipho melanesiensis BI429	Thermotoga lettingae TMO
Thermotoga petrophila RKU-1	Thermotoga sp. RQ2	Thiobacillus denitrificans ATCC 25259	Thiomicrospira crunogena XCL-2	Trichodesmium erythraeum IMS101	Verminephrobacter eiseniae EF01-2	Victivallis vadensis ATCC BAA-548
Xanthobacter autotrophicus Py2	Xylella fastidiosa Ann-1	Xylella fastidiosa Dixon	Xylella fastidiosa M12	Xylella fastidiosa M23	Yersinia pestis Antiqua	Yersinia pestis Nepal516
Yersinia pestis Pestoides F	Yersinia pseudotuberculosis PB1/+	Yersinia pseudotuberculosis YPIII