Schizophyllum commune v1.0
Status
v.1.0 (March,2009): The assembly release version 1.0 of whole genome shotgun reads was constructed with Arachne, using paired end sequencing reads at an average coverage of ~8.29X. After trimming for vector and quality, 506,140 reads assembled into 36 main genome scaffolds totaling 38.5 MB. Roughly half of the genome is contained in 5 scaffolds all at least 2.5 MB in length.
The current draft release, version 1.0, includes a total of 13,181 gene models predicted and functionally annotated using the JGI annotation pipeline.
Collaborators
- Friedrich-Schiller University, Germany (Erika Kothe)
- Pacific Northwest National Laboratory, WA, USA (Vanessa Bailey, Scott Baker, Jon Magnuson)
- Southeast Missouri State University, MO, USA (Walt Lilly, Allen Gathman)
- Southern Illinois University at Edwardsville, IL, USA (Tom Fowler)
- Union College, NY, USA (Stephen Horton)
- Universiteit Utrecht, The Netherlands (Luis Lugones, Han Wosten)
