Status
The Cerrena unicolor genome was sequenced using the Illumina platform and annotated using the JGI fungal annotation pipeline and custom analyses.
Summary statistics for the Cerrena unicolor v1.0 release
are below.
| Genome Assembly | |
| Genome Assembly size (Mbp} | 36.00 |
| Sequencing read coverage depth | 189.6 |
| # of contigs | 1462 |
| # of scaffolds | 547 |
| # of scaffolds >= 2Kbp | 371 |
| Scaffold N50 | 22 |
| Scaffold L50 (Mbp) | 0.46 |
| # of gaps | 915 |
| % of scaffold length in gaps | 2.8% |
| Three largest Scaffolds (Mbp) | 1.70, 1.37, 1.21 |
| Gene Models | FilteredModels1 | |
| length (bp) of: | average | median |
| gene | 1636 | 1345 |
| transcript | 1231 | 1020 |
| exon | 208 | 133 |
| intron | 84 | 59 |
| description: | ||
| protein length (aa) | 410 | 340 |
| exons per gene | 5.92 | 5 |
| # of gene models | 12072 |
Collaborators
Steven Singer, Lawrence Berkeley National Laboratory
Funding
The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.
